RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OGTO15294 1046 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 FSHRP23945 695 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 GDI1P31150 447 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 SERPINB8P50452 374 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 PGDP52209 483 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 TARBP2Q15633 366 aaKnown RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 C15orf59Q2T9L4 293 aaPredicted RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.971e-7■■■■□ 23
VCAN-208ENST00000512590 LYPLAL1Q5VWZ2 237 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 DENND5AQ6IQ26 1287 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 ZER1Q7Z7L7 766 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 PLA2G15Q8NCC3 412 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 TOR1AIP2Q8NFQ8 470 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 DCAKDQ8WVC6 231 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 EFHD2Q96C19 240 aaPredicted RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 CELF6Q96J87 481 aaKnown RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 SLC38A2Q96QD8 506 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 FUT8Q9BYC5 575 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 FRMD8P1Q9BZ68 369 aaPredicted RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 A1CFQ9NQ94 594 aaKnown RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 ZNF355PQ9NSJ1 428 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 MARCOQ9UEW3 520 aaPredicted RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 GGA2Q9UJY4 613 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 IKZF2Q9UKS7 526 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 A0A1W2PQ72 361 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 G3V2T6 193 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 PLIN3O60664 434 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 SLC13A2Q13183 592 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 ALG10Q5BKT4 473 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 WDR93Q6P2C0 686 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 POTEAQ6S8J7 498 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 HFE2Q6ZVN8 426 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 TM6SF1Q9BZW5 370 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 GLOD4Q9HC38 313 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 SDHAF3Q9NRP4 125 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 ANKEF1Q9NU02 776 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 COMMD8Q9NX08 183 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 PADI2Q9Y2J8 665 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 OAS3Q9Y6K5 1087 aaKnown RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 SLC15A5A6NIM6 579 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 ACOT7O00154 380 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 PDCD5O14737 125 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 TNFAIP8O95379 198 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 ZNF823P16415 610 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 FMO4P31512 558 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 TIE1P35590 1138 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 RAP1GAPP47736 663 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 HCAR3P49019 387 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 GABPB1Q06547 395 aaPredicted RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 GRM3Q14832 879 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 SEZ6Q53EL9 994 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 CTU1Q7Z7A3 348 aaKnown RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 FIG4Q92562 907 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 RBM18Q96H35 190 aaKnown RBP9.01□□□□□ -0.97
VCAN-208ENST00000512590 ASB8Q9H765 288 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 NRDE2Q9H7Z3 1164 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 EXD2Q9NVH0 621 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 ADAM18Q9Y3Q7 739 aa9.01□□□□□ -0.97
VCAN-208ENST00000512590 C15orf38-AP3S2A0A0A6YYH1 394 aa9□□□□□ -0.97
VCAN-208ENST00000512590 SH2D7A6NKC9 451 aaPredicted RBP9□□□□□ -0.97
VCAN-208ENST00000512590 FFAR2O15552 330 aa9□□□□□ -0.97
VCAN-208ENST00000512590 LINGO3P0C6S8 592 aa9□□□□□ -0.97
VCAN-208ENST00000512590 SELPP16109 830 aa9□□□□□ -0.97
VCAN-208ENST00000512590 FGFR3P22607 806 aa9□□□□□ -0.97
VCAN-208ENST00000512590 BDNFP23560 247 aa9□□□□□ -0.97
VCAN-208ENST00000512590 CEBPGP53567 150 aa9□□□□□ -0.97
VCAN-208ENST00000512590 CREB5Q02930 508 aa9□□□□□ -0.97
VCAN-208ENST00000512590 DNASE1L2Q92874 299 aa9□□□□□ -0.97
VCAN-208ENST00000512590 RELTQ969Z4 430 aa9□□□□□ -0.97
VCAN-208ENST00000512590 TRMT61BQ9BVS5 477 aaKnown RBP9□□□□□ -0.97
VCAN-208ENST00000512590 PIF1Q9H611 641 aa9□□□□□ -0.97
VCAN-208ENST00000512590 RRN3Q9NYV6 651 aa9□□□□□ -0.97
VCAN-208ENST00000512590 SUSD2Q9UGT4 822 aa9□□□□□ -0.97
VCAN-208ENST00000512590 PVALEFA0A1B0GWK0 134 aa9□□□□□ -0.97
VCAN-208ENST00000512590 TRDMT1O14717 391 aaKnown RBP9□□□□□ -0.97
VCAN-208ENST00000512590 KLHL2O95198 593 aa9□□□□□ -0.97
VCAN-208ENST00000512590 TP53P04637 393 aaPredicted RBP9□□□□□ -0.97
VCAN-208ENST00000512590 GYS1P13807 737 aa9□□□□□ -0.97
VCAN-208ENST00000512590 INSRRP14616 1297 aa9□□□□□ -0.97
VCAN-208ENST00000512590 PGM1P36871 562 aa9□□□□□ -0.97
VCAN-208ENST00000512590 RPS15P62841 145 aaKnown RBP9□□□□□ -0.97
VCAN-208ENST00000512590 IRX1P78414 480 aaPredicted RBP9□□□□□ -0.97
VCAN-208ENST00000512590 CHAF1BQ13112 559 aa9□□□□□ -0.97
VCAN-208ENST00000512590 MSLNQ13421 630 aaPredicted RBP9□□□□□ -0.97
VCAN-208ENST00000512590 MZT2AQ6P582 158 aa9□□□□□ -0.97
VCAN-208ENST00000512590 SLC27A1Q6PCB7 646 aa9□□□□□ -0.97
VCAN-208ENST00000512590 KLHL17Q6TDP4 642 aa9□□□□□ -0.97
VCAN-208ENST00000512590 SYDE1Q6ZW31 735 aaPredicted RBP9□□□□□ -0.97
VCAN-208ENST00000512590 CHSY3Q70JA7 882 aa9□□□□□ -0.97
VCAN-208ENST00000512590 CCDC33Q8N5R6 958 aa9□□□□□ -0.97
VCAN-208ENST00000512590 ZNF366Q8N895 744 aa9□□□□□ -0.97
VCAN-208ENST00000512590 L3MBTL4Q8NA19 623 aa9□□□□□ -0.97
VCAN-208ENST00000512590 LCN9Q8WX39 176 aa9□□□□□ -0.97
VCAN-208ENST00000512590 LINGO1Q96FE5 620 aa9□□□□□ -0.97
VCAN-208ENST00000512590 NSL1Q96IY1 281 aa9□□□□□ -0.97
VCAN-208ENST00000512590 C7orf25Q9BPX7 421 aa9□□□□□ -0.97
VCAN-208ENST00000512590 KCTD14Q9BQ13 255 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms