RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
RNF4-215ENST00000511843 PLXNB3Q9ULL4 1909 aa13.48□□□□□ -0.25
RNF4-215ENST00000511843 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 TMEM110-MUSTN1A8MSY1 372 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 PRAMEF26H0Y7S4 382 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 H3BRJ5 948 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 MFAP3LO75121 409 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 CD48P09326 243 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 TRIM14Q14142 442 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 STAT4Q14765 748 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 ACAP1Q15027 740 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 DPYSL2Q16555 572 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 SLC18A3Q16572 532 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 ASTE1Q2TB18 679 aaPredicted RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 ATP13A4Q4VNC1 1196 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 INO80DQ53TQ3 878 aaPredicted RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 GDPD4Q6W3E5 623 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 PSTKQ8IV42 348 aaKnown RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 MFSD2AQ8NA29 543 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 TSEN2Q8NCE0 465 aaKnown RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 ELF4Q99607 663 aaPredicted RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
RNF4-215ENST00000511843 DEF6Q9H4E7 631 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 PCDH18Q9HCL0 1135 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 GDF3Q9NR23 364 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 CTTNBP2NLQ9P2B4 639 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 WASF3Q9UPY6 502 aa13.47□□□□□ -0.25
RNF4-215ENST00000511843 COL5A1P20908 1838 aaPredicted RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 ARID1BQ8NFD5 2236 aaPredicted RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 TTC24A2A3L6 582 aaPredicted RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 MYO1FO00160 1098 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 RAD51BO15315 384 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 FLRT2O43155 660 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 AKR1B10O60218 316 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SDC3O75056 442 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 ATXN1LP0C7T5 689 aaKnown RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 HNRNPA2B1P22626 353 aaKnown RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 ARL4AP40617 200 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SEMG2Q02383 582 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 BNIP3Q12983 259 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SLC45A4Q5BKX6 768 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 DBX2Q6ZNG2 339 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 GCNT7Q6ZNI0 430 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 OR13H1Q8NG92 308 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 BAHD1Q8TBE0 780 aaPredicted RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 CASKIN2Q8WXE0 1202 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SKA1Q96BD8 255 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 CSPG4P5Q96PW8 444 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SCNM1Q9BWG6 230 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 CALN1Q9BXU9 219 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SLC17A9Q9BYT1 436 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 SP110Q9HB58 689 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 KLK13Q9UKR3 277 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 TPX2Q9ULW0 747 aaKnown RBP13.46□□□□□ -0.25
RNF4-215ENST00000511843 PCDHGB2Q9Y5G2 931 aa13.46□□□□□ -0.25
RNF4-215ENST00000511843 NEMP1O14524 444 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 MUSKO15146 869 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
RNF4-215ENST00000511843 PALMO75781 387 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 PAK4O96013 591 aaPredicted RBP13.45□□□□□ -0.26
RNF4-215ENST00000511843 PRKCGP05129 697 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TPM1P09493 284 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 THEGLP0DJG4 465 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TIMP2P16035 220 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 AKT2P31751 481 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 NUDT1P36639 197 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 HCAR3P49019 387 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 CDH6P55285 790 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TAS2R40P59535 323 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 SHC2P98077 582 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 KRT81Q14533 505 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 BOLA3Q53S33 107 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 CCDC157Q569K6 752 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 NEK5Q6P3R8 708 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TMCO3Q6UWJ1 677 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TTC7BQ86TV6 843 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 CAMK1DQ8IU85 385 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TEKT4Q8WW24 435 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 CTNNBL1Q8WYA6 563 aaPredicted RBP13.45□□□□□ -0.26
RNF4-215ENST00000511843 KLHDC7BQ96G42 594 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 LRIG1Q96JA1 1093 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 NSMCE3Q96MG7 304 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 WRAP53Q9BUR4 548 aaKnown RBP13.45□□□□□ -0.26
RNF4-215ENST00000511843 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
RNF4-215ENST00000511843 TRIM5Q9C035 493 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms