RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PAMP19021 973 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 GPD1P21695 349 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PTGS1P23219 599 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 VAMP1P23763 118 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 EPHB2P29323 1055 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PLK1P53350 603 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 MARSP56192 900 aaKnown RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 DAOAP59103 153 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PPP2R2AP63151 447 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 RBM10P98175 930 aaKnown RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 SLC6A3Q01959 620 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TBL3Q12788 808 aaKnown RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 LRMPQ12912 555 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PDK1Q15118 436 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TCEA2Q15560 299 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PPP2R5EQ16537 467 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 SLC5A9Q2M3M2 681 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TTLL9Q3SXZ7 439 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 ZC2HC1CQ53FD0 456 aaPredicted RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PRRT3Q5FWE3 981 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 ZC3H12BQ5HYM0 836 aaKnown RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 MS4A13Q5J8X5 152 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 YOD1Q5VVQ6 348 aaPredicted RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 RAP1GAP2Q684P5 730 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 FAM180AQ6UWF9 173 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 C4orf22Q6V702 233 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TAOK1Q7L7X3 1001 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 SLFN11Q7Z7L1 901 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 SKAP1Q86WV1 359 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 FAM129CQ86XR2 697 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TMEM25Q86YD3 366 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 IQCKQ8N0W5 287 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 FAM181AQ8N9Y4 354 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 OR2AP1Q8NGE2 309 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 KRT35Q92764 455 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TTC17Q96AE7 1141 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PRR11Q96HE9 360 aaPredicted RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 C5orf34Q96MH7 638 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 OR2M4Q96R27 311 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 CBWD1Q9BRT8 395 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 SARGQ9BW04 601 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 NUP85Q9BW27 656 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 PARVAQ9NVD7 372 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 TRNAU1APQ9NX07 287 aaKnown RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 DDX56Q9NY93 547 aaKnown RBP2.88□□□□□ -1.95
CLOCK-209ENST00000511124 ATP8A1Q9Y2Q0 1164 aa2.88□□□□□ -1.95
CLOCK-209ENST00000511124 FAM170AA1A519 330 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C2orf81A6NN90 581 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LMO7DNF2Z398 122 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CDK2AP1O14519 115 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NVLO15381 856 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ARHGEF9O43307 516 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SRGAP2O75044 1071 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 VPS26AO75436 327 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PALMO75781 387 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ANXA9O76027 345 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 STBD1O95210 358 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC35G4P0C7Q5 338 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 KRT3P12035 628 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 BRAFP15056 766 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MSH3P20585 1137 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CYP2A7P20853 494 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SYT1P21579 422 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ACP1P24666 158 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PSMA2P25787 234 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MZF1P28698 734 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CYLC1P35663 651 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FMO5P49326 533 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 GUCY2FP51841 1108 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NDST2P52849 883 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NXPH1P58417 271 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RPS14P62263 151 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 GNA12Q03113 381 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FOXM1Q08050 763 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 INCA1Q0VD86 236 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TARDBPQ13148 414 aaKnown RBP eCLIP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SCGB2A2Q13296 93 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 COL9A2Q14055 689 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PIGHQ14442 188 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 INO80DQ53TQ3 878 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C22orf39Q6P5X5 142 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CACUL1Q86Y37 369 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCDC13Q8IYE1 715 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NLGN4XQ8N0W4 816 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CRIPAKQ8N1N5 446 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 STK40Q8N2I9 435 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LINC00301Q8NCQ3 95 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NLGN4YQ8NFZ3 816 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 OR10T2Q8NGX3 314 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ZFPM2Q8WW38 1151 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ARHGEF2Q92974 986 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CHFRQ96EP1 664 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 EXOC2Q96KP1 924 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PLA2G2FQ9BZM2 168 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ILKAPQ9H0C8 392 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LRRN3Q9H3W5 708 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 OSGEPL1Q9H4B0 414 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CACYBPQ9HB71 228 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 IL21Q9HBE4 155 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms