RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ITGB7P26010 798 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 CCR5P51681 352 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 LIMK1P53667 647 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 MAXP61244 160 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 SNRPD1P62314 119 aaKnown RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 ADCY2Q08462 1091 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 PUM1Q14671 1186 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNF8-206ENST00000509989 PTPRRQ15256 657 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 HADHQ16836 314 aaKnown RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 NPNTQ6UXI9 565 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 CAMK1DQ8IU85 385 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 PLPP6Q8IY26 295 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 KCTD6Q8NC69 237 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 FAF2Q96CS3 445 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 CCDC114Q96M63 670 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 CAMK1GQ96NX5 476 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 HDAC8Q9BY41 377 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 PCED1AQ9H1Q7 454 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 SP110Q9HB58 689 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 TMEM9BQ9NQ34 198 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 INTUQ9ULD6 942 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 FNDC3AQ9Y2H6 1198 aaKnown RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
SNF8-206ENST00000509989 FADS3Q9Y5Q0 445 aa13.75□□□□□ -0.21
SNF8-206ENST00000509989 CXorf51AA0A1B0GTR3 108 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 LRRD1A4D1F6 860 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 ZSCAN5CA6NGD5 496 aaPredicted RBP13.74□□□□□ -0.21
SNF8-206ENST00000509989 SLC31A1O15431 190 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 PALMO75781 387 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 IGSF6O95976 241 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 TIMP2P16035 220 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 CDC25BP30305 580 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 HOXD12P35452 270 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 NOP2P46087 812 aaKnown RBP13.74□□□□□ -0.21
SNF8-206ENST00000509989 NEK3P51956 506 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 GEMIN4P57678 1058 aaKnown RBP13.74□□□□□ -0.21
SNF8-206ENST00000509989 FAM193AP78312 1265 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 IL10RBQ08334 325 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
SNF8-206ENST00000509989 ZNF284Q2VY69 593 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 ZNF805Q5CZA5 627 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 MFSD7Q6UXD7 560 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 GDPD4Q6W3E5 623 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 SRLQ86TD4 932 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 RHOT2Q8IXI1 618 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 CCDC170Q8IYT3 715 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 PLD5Q8N7P1 536 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 KRT35Q92764 455 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 SMIM14Q96QK8 99 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 RTKNQ9BST9 563 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
SNF8-206ENST00000509989 ARID1BQ8NFD5 2236 aaPredicted RBP13.74□□□□□ -0.21
SNF8-206ENST00000509989 A0A0U1RQS6 177 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 SLC7A4O43246 635 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 PCDH8O95206 1070 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 KRT1P04264 644 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 KRT10P13645 584 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 CD59P13987 128 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 GNSP15586 552 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 KCNA4P22459 653 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 CLDN2P57739 230 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 IL9RQ01113 521 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
SNF8-206ENST00000509989 HLA-BQ31612 363 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 TPRG1LQ5T0D9 272 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 ZFYVE27Q5T4F4 411 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 NYAP1Q6ZVC0 841 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 DGLUCYQ7Z3D6 616 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 TRIM69Q86WT6 500 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 SPATS2Q86XZ4 545 aaKnown RBP13.73□□□□□ -0.21
SNF8-206ENST00000509989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNF8-206ENST00000509989 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 SERAC1Q96JX3 654 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 RNF157Q96PX1 679 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 BAG1Q99933 345 aaPredicted RBP13.73□□□□□ -0.21
SNF8-206ENST00000509989 ZNF670Q9BS34 389 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 HERPUD2Q9BSE4 406 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 AASDHPPTQ9NRN7 309 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 SUSD2Q9UGT4 822 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 NCOR2Q9Y618 2525 aa13.73□□□□□ -0.21
SNF8-206ENST00000509989 IGLON5A6NGN9 336 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 AREL1O15033 823 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 KRT7P08729 469 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 CR2P20023 1033 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 CTSKP43235 329 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 ZNF135P52742 658 aaPredicted RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 HADHBP55084 474 aaKnown RBP13.72□□□□□ -0.21
SNF8-206ENST00000509989 GALNT2Q10471 571 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 PDK2Q15119 407 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 SHBQ15464 509 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 SPA17Q15506 151 aa13.72□□□□□ -0.21
SNF8-206ENST00000509989 FBXL19Q6PCT2 694 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms