RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 ARHGAP28Q9P2N2 729 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 COPS7AQ9UBW8 275 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 SNX13Q9Y5W8 968 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 CNTNAP1P78357 1384 aa9.07□□□□□ -0.96
KLHL3-209ENST00000508657 PNPLA6Q8IY17 1366 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 PHGDHO43175 533 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SLC28A2O43868 658 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ATG7O95352 703 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SYDE1Q6ZW31 735 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 KAT2AQ92830 837 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 TOP1MTQ969P6 601 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CYP3A43Q9HB55 503 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ATAD3AQ9NVI7 634 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 RRP15Q9Y3B9 282 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 A6NL46 340 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 H3BMM5 538 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 GPR25O00155 361 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 LGR5O75473 907 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 NDUFA9Q16795 377 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM26Q6ZUK4 368 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SV2AQ7L0J3 742 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ARHGEF19Q8IW93 802 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 DBF4BQ8NFT6 615 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 VPS33AQ96AX1 596 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 LMAN2LQ9H0V9 348 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 AGO1Q9UL18 857 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 KHNYNO15037 678 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SSR2P43308 183 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SLC7A2P52569 658 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 FAM91A1Q658Y4 838 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CRTC1Q6UUV9 634 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 BNC2Q6ZN30 1099 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CCDC103Q8IW40 242 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 EID3Q8N140 333 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ZNF557Q8N988 423 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 LCN9Q8WX39 176 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 DNASE1L2Q92874 299 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CYP8B1Q9UNU6 501 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ABCC3O15438 1527 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ARHGEF40Q8TER5 1519 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 RAD51CO43502 376 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 TIMM44O43615 452 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 PRKCGP05129 697 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 NPR3P17342 541 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 APOBEC3HQ6NTF7 200 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ERCC6L2Q5T890 1561 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 FAM205AQ6ZU69 1335 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 IDSP22304 550 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 HNMTP50135 292 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 RNASE12Q5GAN4 147 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 DEF8Q6ZN54 512 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 LRRC69Q6ZNQ3 347 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 ARMC8Q8IUR7 673 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 RASGEF1AQ8N9B8 481 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CCDC54Q8NEL0 328 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 FBXO30Q8TB52 745 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CMTM5Q96DZ9 223 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 PRRG3Q9BZD7 231 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 NMUR1Q9HB89 426 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 TUBGCP4Q9UGJ1 667 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 DCDC2Q9UHG0 476 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 NAALADL1Q9UQQ1 740 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 COLEC10Q9Y6Z7 277 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 CFAP73A6NFT4 308 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SAC3D1A6NKF1 404 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 AHCYP23526 432 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 SEL1L3Q68CR1 1132 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 MMAAQ8IVH4 418 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 OR52L1Q8NGH7 329 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 VANGL1Q8TAA9 524 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 MRPS33Q9Y291 106 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 RAD54BQ9Y620 910 aa9.06□□□□□ -0.96
KLHL3-209ENST00000508657 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
KLHL3-209ENST00000508657 C1RP00736 705 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 DGKGP49619 791 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ATXN1P54253 815 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 DNAJC3Q13217 504 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SLC8B1Q6J4K2 584 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 MSANTD2Q6P1R3 559 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 FUT10Q6P4F1 479 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 NLGN4XQ8N0W4 816 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ADSSL1Q8N142 457 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SMG9Q9H0W8 520 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SRMSQ9H3Y6 488 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 USP27XA6NNY8 438 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 FAM25EA8MYX2 175 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 EPHB6O15197 1021 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 EPN2O95208 641 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 FGF19O95750 216 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 UBTFL6P0CB48 400 aaPredicted RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 S100A3P33764 101 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 PPP4CP60510 307 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 GMFBP60983 142 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SLC6A3Q01959 620 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms