RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 C4orf22Q6V702 233 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 PLPP6Q8IY26 295 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 STK40Q8N2I9 435 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 TXNDC5Q8NBS9 432 aaKnown RBP14.36□□□□□ -0.11
RNF4-208ENST00000507247 CCHCR1Q8TD31 782 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 CPT1BQ92523 772 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 GABRG3Q99928 467 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 LRFN3Q9BTN0 628 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 RAB17Q9H0T7 212 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 EPC1Q9H2F5 836 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 LMAN1LQ9HAT1 526 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 PRSS16Q9NQE7 514 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 HAUS2Q9NVX0 235 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 HECAQ9UBI9 543 aaPredicted RBP14.36□□□□□ -0.11
RNF4-208ENST00000507247 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.36□□□□□ -0.11
RNF4-208ENST00000507247 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
RNF4-208ENST00000507247 V9GYY5 206 aaPredicted RBP14.36□□□□□ -0.11
RNF4-208ENST00000507247 MYLKQ15746 1914 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 TCRBV7S3A2A0A539 114 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 ESYT3A0FGR9 886 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 FAM170BA6NMN3 283 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 TP73O15350 636 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 PIGNO95427 931 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 CTSLP07711 333 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 GEMP55040 296 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 AP1S1P61966 158 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 SIGLEC14Q08ET2 396 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 TRAF2Q12933 501 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 LRRC32Q14392 662 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 KCNJ11Q14654 390 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 E2F5Q15329 346 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 MYLK3Q32MK0 819 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 RALGPS1Q5JS13 557 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 RNASEH2BQ5TBB1 312 aaKnown RBP14.35□□□□□ -0.11
RNF4-208ENST00000507247 ANKRD22Q5VYY1 191 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 IZUMO3Q5VZ72 239 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 KIAA1211LQ6NV74 962 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 RYBPQ8N488 228 aaPredicted RBP14.35□□□□□ -0.11
RNF4-208ENST00000507247 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
RNF4-208ENST00000507247 SEC14L1Q92503 715 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 EDAQ92838 391 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 LRRC45Q96CN5 670 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 SNF8Q96H20 258 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 MRGPRX2Q96LB1 330 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 HEPHQ9BQS7 1158 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 ZDHHC6Q9H6R6 413 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 POLR3BQ9NW08 1133 aaPredicted RBP14.35□□□□□ -0.11
RNF4-208ENST00000507247 GRHL1Q9NZI5 618 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 SUN2Q9UH99 717 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
RNF4-208ENST00000507247 WASF2Q9Y6W5 498 aa14.35□□□□□ -0.11
RNF4-208ENST00000507247 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 DCXO43602 365 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 PMPCBO75439 489 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 ANXA9O76027 345 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 TMEM63AO94886 807 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 POP4O95707 220 aaKnown RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 PDGFBP01127 241 aaPredicted RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 SERPINF2P08697 491 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 HOXB2P14652 356 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 CES1P23141 567 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 MAGEA6P43360 314 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 RECQLP46063 649 aaPredicted RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 MPP3Q13368 585 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 CAMK2GQ13555 558 aaPredicted RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 GAS6Q14393 721 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 PRPSAP1Q14558 356 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 NAA30Q147X3 362 aaPredicted RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 SLC14A2Q15849 920 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 PCSK7Q16549 785 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 ERCC6LQ2NKX8 1250 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 CCDC70Q6NSX1 233 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 TRMT11Q7Z4G4 463 aaKnown RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 CAMK1DQ8IU85 385 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 PJA1Q8NG27 643 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 GRIN3AQ8TCU5 1115 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 FAM129BQ96TA1 746 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 NELL2Q99435 816 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 CPEB1Q9BZB8 566 aaKnown RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 ANKZF1Q9H8Y5 726 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 TPX2Q9ULW0 747 aaKnown RBP14.34□□□□□ -0.11
RNF4-208ENST00000507247 PCDHGC4Q9Y5F7 938 aa14.34□□□□□ -0.11
RNF4-208ENST00000507247 TECTAO75443 2155 aa14.33□□□□□ -0.11
RNF4-208ENST00000507247 A0A1W2PQF6 199 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 E7EVH7 732 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 TRAFD1O14545 582 aaPredicted RBP14.33□□□□□ -0.12
RNF4-208ENST00000507247 LEFTY1O75610 366 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 AP2A1O95782 977 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 PRLP01236 227 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 APRTP07741 180 aa14.33□□□□□ -0.12
RNF4-208ENST00000507247 TPSB2P20231 275 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms