RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 MMP9P14780 707 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CREB1P16220 341 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ARF4P18085 180 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 TRIM21P19474 475 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 DNASE1P24855 282 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 HOXA10P31260 410 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 IL15P40933 162 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CASP3P42574 277 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 PTPN9P43378 593 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CRKLP46109 303 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 RABIFP47224 123 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 MTNR1AP48039 350 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CAMLGP49069 296 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CLK3P49761 638 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 SULT1E1P49888 294 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 IRAK1P51617 712 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 OAZ1P54368 228 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CASP9P55211 416 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 YPEL5P62699 121 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CYP4A11Q02928 519 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 MZT1Q08AG7 82 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 BMPR2Q13873 1038 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 KRT33BQ14525 404 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZNF273Q14593 569 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 RRP1BQ14684 758 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 USP10Q14694 798 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CD300EQ496F6 205 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 TEX35Q5T0J7 233 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CCDC183Q5T5S1 534 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZNF648Q5T619 568 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 SERTAD4-AS1Q5TG53 156 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 IRGCQ6NXR0 463 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ACSM6Q6P461 480 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 IL20RBQ6UXL0 311 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 RBPMS2Q6ZRY4 209 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CENPVQ7Z7K6 275 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 DSG4Q86SJ6 1040 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CEP57Q86XR8 500 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM217AQ8IXS0 508 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 MMP21Q8N119 569 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ENDOVQ8N8Q3 282 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM216AQ8WUB2 273 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 XAGE5Q8WWM1 108 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 LPGAT1Q92604 370 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 TMEM125Q96AQ2 219 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CDCA5Q96FF9 252 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 TRMT61AQ96FX7 289 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 LINC00615Q96LM1 132 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 YTHDC1Q96MU7 727 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CACNG6Q9BXT2 260 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 TPSD1Q9BZJ3 242 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 SLC6A17Q9H1V8 727 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 VPS37BQ9H9H4 285 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 KCNK9Q9NPC2 374 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ENTPD7Q9NQZ7 604 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 POLE3Q9NRF9 147 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 SIRT5Q9NXA8 310 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CNIH4Q9P003 139 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 LAMP5Q9UJQ1 280 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 PLAGL1Q9UM63 463 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 RPH3AQ9Y2J0 694 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM96BQ9Y3D0 163 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 NR2E1Q9Y466 385 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 CMAHPQ9Y471 501 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ACEP12821 1306 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 AOX1Q06278 1338 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GPR75-ASB3A0A0A6YYF3 556 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CLRN2A0PK11 232 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SH3D21A4FU49 640 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ANXA2P2A6NMY6 339 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 C1QTNF9BB2RNN3 333 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GPR89AB7ZAQ6 455 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 H0YCG3 227 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CES2O00748 559 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PPM1DO15297 605 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SPRY1O43609 319 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SLC25A17O43808 307 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 VEGFDO43915 354 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 TSC22D2O75157 780 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 USP12O75317 370 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GBAP04062 536 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 RLN1P04808 185 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ALPPP05187 535 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 VIMP08670 466 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GPR89BP0CG08 455 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ALPPL2P10696 532 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PRG2P13727 222 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ATF2P15336 505 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 RPS2P15880 293 aaKnown RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ITGB5P18084 799 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 CCNA2P20248 432 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 KCNA5P22460 613 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 COL8A1P27658 744 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PBLDP30039 288 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 VIPR1P32241 457 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 GMPRP36959 345 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 KCNJ1P48048 391 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 ATXN3P54252 364 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 PNLIPRP2P54317 469 aa3.73□□□□□ -1.81
HMGB1P22-201ENST00000505315 SNU13P55769 128 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms