RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FZD3Q9NPG1 666 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 DNAJC28Q9NX36 388 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 RP1P56715 2156 aa16.31■□□□□ 0.2
PDLIM7-213ENST00000505074 CCDC187A0A096LP49 1063 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 ILVBLA1L0T0 632 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 PMS2P1A4D2B8 440 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 HNRNPA2B1P22626 353 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 SDC4P31431 198 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 TAS2R38P59533 333 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF542PQ5EBM4 170 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 NEK5Q6P3R8 708 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 GUSBP11Q6P575 273 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 ERN2Q76MJ5 926 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF677Q86XU0 584 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 DCP2Q8IU60 420 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 RYBPQ8N488 228 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 TMIEQ8NEW7 156 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 FAM174AQ8TBP5 190 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 GANQ9H2C0 597 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 CAAP1Q9H8G2 361 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 TMEM59LQ9UK28 342 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 BOD1L1Q8NFC6 3051 aa16.3■□□□□ 0.2
PDLIM7-213ENST00000505074 IGLV3-10A0A075B6K4 115 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 LEFTY1O75610 366 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 FAM87AP0C7U9 286 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 SERPINH1P50454 418 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 CDR2Q01850 454 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 GNA12Q03113 381 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 TLE1Q04724 770 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 KRT31Q15323 416 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 SYCP1Q15431 976 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 C15orf59Q2T9L4 293 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF783Q6ZMS7 281 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 DPY19L3Q6ZPD9 716 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 HORMAD1Q86X24 394 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF354CQ86Y25 554 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 SLC30A5Q8TAD4 765 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 RXFP2Q8WXD0 754 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 ZDHHC6Q9H6R6 413 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 FCF1Q9Y324 198 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-213ENST00000505074 H3BM21 787 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 PPFIA2O75334 1257 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 SOX5P35711 763 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 NEK3P51956 506 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 CLDN2P57739 230 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 FMO1Q01740 532 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 SEL1L3Q68CR1 1132 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 CRTC1Q6UUV9 634 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 PTAR1Q7Z6K3 402 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 SLC22A18ASQ8N1D0 253 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 PCDH20Q8N6Y1 951 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF548Q8NEK5 533 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 WDR48Q8TAF3 677 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 TM6SF2Q9BZW4 377 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 OR12D3Q9UGF7 316 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 DNAI1Q9UI46 699 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 NOCTQ9UK39 431 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 CSNK1G3Q9Y6M4 447 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 TEX15Q9BXT5 2789 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 TRPM6Q9BX84 2022 aa16.28■□□□□ 0.2
PDLIM7-213ENST00000505074 A6NNZ2 444 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 RNF103O00237 685 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ETFBP38117 255 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ANP32AP39687 249 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 STAT1P42224 750 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 NSFP46459 744 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 CCNHP51946 323 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ARF5P84085 180 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 SLC20A2Q08357 652 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 NR0B2Q15466 257 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ZNF284Q2VY69 593 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 RAB6CQ53S08 254 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 CARD16Q5EG05 197 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 TRIM72Q6ZMU5 477 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 GCNT7Q6ZNI0 430 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 Q6ZSR6 202 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ARCQ7LC44 396 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ABI3BPQ7Z7G0 1075 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 OR6K2Q8NGY2 324 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 SELENOOQ9BVL4 669 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 HDAC8Q9BY41 377 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 RAB6CQ9H0N0 254 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 PPARGC1AQ9UBK2 798 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 HPCAL4Q9UM19 191 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
PDLIM7-213ENST00000505074 ACTL7AQ9Y615 435 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms