RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GLIS1Q8NBF1 620 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 RUBCNQ92622 972 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 MKRN2Q9H000 416 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 MUC3BQ9H195 1237 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 AGAP14A8MT82 685 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 MPP3Q13368 585 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 DHX34Q14147 1143 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PARP6Q2NL67 630 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ANKRD20A2Q5SQ80 823 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ANKRD20A1Q5TYW2 823 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ANKRD20A3Q5VUR7 823 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 RELL1Q8IUW5 271 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 RAB7BQ96AH8 199 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 GDAP1L1Q96MZ0 367 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 C1QTNF1Q9BXJ1 281 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 FAM129AQ9BZQ8 928 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 EPC1Q9H2F5 836 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 MRM3Q9HC36 420 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 DOCK9Q9BZ29 2069 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ERI2A8K979 691 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 GJB3O75712 270 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PGLSO95336 258 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 HOXC4P09017 264 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CNR2P34972 360 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 GUCY2DQ02846 1103 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF805Q5CZA5 627 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 SYT10Q6XYQ8 523 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 DPY19L3Q6ZPD9 716 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 DPPA4Q7L190 304 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 C1orf210Q8IVY1 113 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 NAT8LQ8N9F0 302 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 TXNDC5Q8NBS9 432 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 TSEN2Q8NCE0 465 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 MCUQ8NE86 351 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CADM4Q8NFZ8 388 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 TTC8Q8TAM2 541 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CASS4Q9NQ75 786 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PSMD11O00231 422 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZBTB24O43167 697 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ECHS1P30084 290 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 MMP12P39900 470 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CCR5P51681 352 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 TCF15Q12870 199 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 TRAF2Q12933 501 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CHST14Q8NCH0 376 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 SPATA4Q8NEY3 305 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 ATL2Q8NHH9 583 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 FCF1Q9Y324 198 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 IGHV1OR15-9A0A0B4J2B8 117 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 MROH6A6NGR9 719 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 E7ESA3 106 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 APBB3O95704 486 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 RBP3P10745 1247 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 TIMP2P16035 220 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CASQ1P31415 396 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 CCNHP51946 323 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 SNRPD1P62314 119 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 MARC1Q5VT66 337 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 DUPD1Q68J44 220 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 BRAT1Q6PJG6 821 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 HOOK3Q86VS8 718 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PRSS33Q8NF86 280 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PEX13Q92968 403 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 COQ10AQ96MF6 247 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PRRX2Q99811 253 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 HEPHQ9BQS7 1158 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 HEMGNQ9BXL5 484 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 POLR1EQ9GZS1 481 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 DUSP15Q9H1R2 295 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PLAC1Q9HBJ0 212 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 NOD2Q9HC29 1040 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PREBQ9HCU5 417 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 HPCAL4Q9UM19 191 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PCDHGA2Q9Y5H1 932 aa8.38□□□□□ -1.07
CDC42SE2-208ENST00000505065 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 METTL18O95568 372 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 GRIA4P48058 902 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 DCDC1P59894 354 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 CDK16Q00536 496 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 RNASEH2BQ5TBB1 312 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 LINGO4Q6UY18 593 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 AGGF1Q8N302 714 aaeCLIP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 MDGA1Q8NFP4 955 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 MCMBPQ9BTE3 642 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 MAK16Q9BXY0 300 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 TBC1D3BA6NDS4 549 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 PPFIA2O75334 1257 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 AP2A1O95782 977 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 SP9P0CG40 484 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 CXCR5P32302 372 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 CST6Q15828 149 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF776Q68DI1 518 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 LONP2Q86WA8 852 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 DNASE2BQ8WZ79 361 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 SGK2Q9HBY8 427 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 FADS3Q9Y5Q0 445 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 THADAQ6YHU6 1953 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 RGSL1A5PLK6 1076 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms