RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 KDELC2Q7Z4H8 507 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 TRIM74Q86UV6 250 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 TRIM73Q86UV7 250 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 TDRPQ86YL5 185 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 TMC8Q8IU68 726 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 CAMK1DQ8IU85 385 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 ADSSL1Q8N142 457 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 PRKRIP1Q9H875 184 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 BRF2Q9HAW0 419 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 WDR6Q9NNW5 1121 aaKnown RBP5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 RNF146Q9NTX7 359 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 ZNF70Q9UC06 446 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 CORO1CQ9ULV4 474 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 A4GNTQ9UNA3 340 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 COG5Q9UP83 839 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 KCNE2Q9Y6J6 123 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 PCSK5Q92824 1860 aa5.21□□□□□ -1.58
TRAPPC13-205ENST00000504243 FAM237BA0A1B0GVD1 139 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 A0A1W2PPC1 479 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 LDLRAD4O15165 306 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 TGFB1I1O43294 461 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 DOK2O60496 412 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ZC3H11AO75152 810 aaKnown RBP eCLIP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 CELA2AP08217 269 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 UNGP13051 313 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 KRT10P13645 584 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ZNF8P17098 575 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 EDN2P20800 178 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ICAM3P32942 547 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 TNFSF8P32971 234 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 MMP13P45452 471 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 HDAC4P56524 1084 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 SLC18A2Q05940 514 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 PRKG2Q13237 762 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ITGADQ13349 1161 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 CAPSQ13938 189 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 CCNG2Q16589 344 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 HIST2H2ACQ16777 129 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 PIK3CD-AS1Q5SR53 167 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 CADM3Q8N126 398 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ZCCHC9Q8N567 271 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 FRMD1Q8N878 549 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 TMEM174Q8WUU8 243 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 GTF3C6Q969F1 213 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 INTS12Q96CB8 462 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 RNF183Q96D59 192 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ZNF333Q96JL9 665 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 WDR83Q9BRX9 315 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ITPAQ9BY32 194 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 PRSS22Q9GZN4 317 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 SPAG4Q9NPE6 437 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 EHD2Q9NZN4 543 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 SEL1LQ9UBV2 794 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 CARD8Q9Y2G2 431 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 ADGRF5Q8IZF2 1346 aa5.2□□□□□ -1.58
TRAPPC13-205ENST00000504243 CGB1A6NKQ9 187 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 A6NNC1 897 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 STMND1H3BQB6 276 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 GTPBP1O00178 669 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 HSPB6O14558 160 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 PTPN2P17706 415 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 MAPK4P31152 587 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 PTGER1P34995 402 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 PBX3P40426 434 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 MLH1P40692 756 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 EFNA5P52803 228 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 OLR1P78380 273 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 TOMM20Q15388 145 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 EZH2Q15910 746 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 DPCR1Q3MIW9 517 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 Q4G0T1 1027 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 SPATA1Q5VX52 437 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 PAPD7Q5XG87 772 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 FAM205BPQ63HN1 556 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 LRRC8EQ6NSJ5 796 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 TSSK4Q6SA08 328 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 FAM83HQ6ZRV2 1179 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 PALB2Q86YC2 1186 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 OR4N2Q8NGD1 307 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 CEP76Q8TAP6 659 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 USP6NLQ92738 828 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 YME1L1Q96TA2 773 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 TREX2Q9BQ50 279 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 SPATS2LQ9NUQ6 558 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 TRNAU1APQ9NX07 287 aaKnown RBP5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 MSRB1Q9NZV6 116 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 HAO1Q9UJM8 370 aa5.19□□□□□ -1.58
TRAPPC13-205ENST00000504243 A0A1W2PQM1 296 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 PTGES3LE9PB15 166 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 TLR2O60603 784 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 PTP4A3O75365 173 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 HEXAP06865 529 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 MMP3P08254 477 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 CDK4P11802 303 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 LAMP2P13473 410 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 CTPS1P17812 591 aa5.18□□□□□ -1.58
TRAPPC13-205ENST00000504243 TTKP33981 857 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms