RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ULK2Q8IYT8 1036 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 AADATQ8N5Z0 425 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PTGR2Q8N8N7 351 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PPP1R13LQ8WUF5 828 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 MED8Q96G25 268 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 LRRC4CQ9HCJ2 640 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PRPF19Q9UMS4 504 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 TCF3P15923 654 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PSMA3P25788 255 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 GRIA3P42263 894 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 NR1H2P55055 460 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 UBAP2LQ14157 1087 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 INAQ16352 499 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 FAM35AQ86V20 835 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 SYTL1Q8IYJ3 562 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 FAM50BQ9Y247 325 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PABPC1P11940 636 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 RPL5P46777 297 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 TOP3AQ13472 1001 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 STXBP5Q5T5C0 1151 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 PPP1R26Q5T8A7 1209 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.31■□□□□ 0.24e-9■■■■■ 83.5
HMGXB3-202ENST00000503427 TPD52L3Q96J77 140 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 SERAC1Q96JX3 654 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 ZYG11BQ9C0D3 744 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 CYLDQ9NQC7 956 aa16.31■□□□□ 0.2
HMGXB3-202ENST00000503427 DYTNA2CJ06 578 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 GOT1P17174 413 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 MMP8P22894 467 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 MAPK8P45983 427 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 SMARCB1Q12824 385 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 TSPAN14Q8NG11 270 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 FBXO6Q9NRD1 293 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 LEF1Q9UJU2 399 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 IFRD1O00458 451 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 ABCB1P08183 1280 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 PPM1AP35813 382 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 NPY5RQ15761 445 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 LACTB2Q53H82 288 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 TYW3Q6IPR3 259 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 LCLAT1Q6UWP7 414 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 MLYCDO95822 493 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 C4BPAP04003 597 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 SERPINA4P29622 427 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 XIAPP98170 497 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 TNK2Q07912 1038 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 RIPK1Q13546 671 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 MRPS26Q9BYN8 205 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 C6orf62Q9GZU0 229 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 HMG20AQ9NP66 347 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 SNX8Q9Y5X2 465 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 ZMPSTE24O75844 475 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 FGFR1P11362 822 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 TFEBP19484 476 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 C4BPBP20851 252 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 FGFR3P22607 806 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 CENPAP49450 140 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 GPR15P49685 360 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 PACS1Q6VY07 963 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 C10orf53Q8N6V4 93 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 KCTD4Q8WVF5 259 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 C1orf50Q9BV19 199 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 SNX15Q9NRS6 342 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 TMEM216Q9P0N5 145 aa16.3■□□□□ 0.2
HMGXB3-202ENST00000503427 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ZBTB14O43829 449 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 TTYH3Q9C0H2 523 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 CAPN10Q9HC96 672 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 SPG21Q9NZD8 308 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 CORO1CQ9ULV4 474 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 SOWAHBA6NEL2 793 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 EIF2S1P05198 315 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 CD86P42081 329 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 BRMS1LQ5PSV4 323 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ZNF621Q6ZSS3 439 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ALYREFQ86V81 257 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 C12orf29Q8N999 325 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 LRRC57Q8N9N7 239 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 COMMD3-BMI1R4GMX3 469 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 PIAS1O75925 651 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ACSM2AQ08AH3 577 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 BNIP2Q12982 314 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 RAP1GAP2Q684P5 730 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ACSM2BQ68CK6 577 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 STRADAQ7RTN6 431 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 MARK4Q96L34 752 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 LGMNQ99538 433 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms