RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PTAR1Q7Z6K3 402 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-204ENST00000503215 C1QTNF2Q9BXJ5 285 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 PCSK1NQ9UHG2 260 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 KLF15Q9UIH9 416 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 RAXQ9Y2V3 346 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 PCDHGA1Q9Y5H4 931 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 HS3ST3A1Q9Y663 406 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 URB1O60287 2271 aaKnown RBP16.49■□□□□ 0.23
SCLT1-204ENST00000503215 A0A1B0GTH6 734 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 CXorf51AA0A1B0GTR3 108 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 ANKRD62A6NC57 917 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 WASH4PA8MWX3 477 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 J3KR12 359 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 FTLP02792 175 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-204ENST00000503215 CCDC172P0C7W6 258 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 PSMA2P25787 234 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 GEMIN4P57678 1058 aaKnown RBP16.49■□□□□ 0.23
SCLT1-204ENST00000503215 FZD2Q14332 565 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 KIAA1161Q6NSJ0 714 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 UMODL1-AS1Q8N2C9 162 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 CELF6Q96J87 481 aaKnown RBP16.49■□□□□ 0.23
SCLT1-204ENST00000503215 EXOC2Q96KP1 924 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 EPAS1Q99814 870 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 TTYH3Q9C0H2 523 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 GPR27Q9NS67 375 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 AIPL1Q9NZN9 384 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 LHX3Q9UBR4 397 aa16.49■□□□□ 0.23
SCLT1-204ENST00000503215 LAMA5O15230 3695 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 TMEM191CA6NGB0 347 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 SMTNL1A8MU46 457 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 NEMP1O14524 444 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 AREL1O15033 823 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 PIAS2O75928 621 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 NEBLO76041 1014 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 JUPP14923 745 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 TIMP2P16035 220 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 CKMT2P17540 419 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 YBEYP58557 167 aaPredicted RBP16.48■□□□□ 0.23
SCLT1-204ENST00000503215 NR1I3Q14994 352 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 GDPD4Q6W3E5 623 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 CYP4V2Q6ZWL3 525 aaPredicted RBP16.48■□□□□ 0.23
SCLT1-204ENST00000503215 TTC7BQ86TV6 843 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 TMPRSS12Q86WS5 348 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 LRIG1Q96JA1 1093 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 VCPIP1Q96JH7 1222 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 GDAP1L1Q96MZ0 367 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 KCTD15Q96SI1 283 aaPredicted RBP16.48■□□□□ 0.23
SCLT1-204ENST00000503215 DHX35Q9H5Z1 703 aaKnown RBP16.48■□□□□ 0.23
SCLT1-204ENST00000503215 LRRC19Q9H756 370 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 PARVAQ9NVD7 372 aa16.48■□□□□ 0.23
SCLT1-204ENST00000503215 ZSCAN5CA6NGD5 496 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-204ENST00000503215 A6NNZ2 444 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 TSPAN6O43657 245 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 MMP20O60882 483 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 PIGNO95427 931 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 TPI1P60174 286 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 RHOAP61586 193 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 TARDBPQ13148 414 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■■■■□ 24.6
SCLT1-204ENST00000503215 SGCGQ13326 291 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 ZNF211Q13398 564 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-204ENST00000503215 HES3Q5TGS1 186 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 KYAT3Q6YP21 454 aaKnown RBP16.47■□□□□ 0.23
SCLT1-204ENST00000503215 TP53INP2Q8IXH6 220 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 SNRNP25Q9BV90 132 aaKnown RBP16.47■□□□□ 0.23
SCLT1-204ENST00000503215 SLC39A8Q9C0K1 460 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 CATSPERBQ9H7T0 1116 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 PDFQ9HBH1 243 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 DNAJC28Q9NX36 388 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 AP4E1Q9UPM8 1137 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 GPSM3Q9Y4H4 160 aa16.47■□□□□ 0.23
SCLT1-204ENST00000503215 CACNA1GO43497 2377 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 BUB1BO60566 1050 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 C1SP09871 688 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 HOXB3P14651 431 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 MIPP30301 263 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 PRKCIP41743 596 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 RGRP47804 291 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 AIF1P55008 147 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 SEMG2Q02383 582 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 PARP15Q460N3 678 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 INO80DQ53TQ3 878 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 ARHGAP36Q6ZRI8 547 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 OR4C6Q8NH72 309 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 RAB7BQ96AH8 199 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 CENPTQ96BT3 561 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 LENG8Q96PV6 779 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 OSBPL1AQ9BXW6 950 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 MBNL1Q9NR56 388 aaKnown RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 CNOT8Q9UFF9 292 aaKnown RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 PNMA8BQ9ULN7 279 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-204ENST00000503215 LHX6Q9UPM6 363 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
SCLT1-204ENST00000503215 LY6G6EA0A0G2JKS1 128 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 SPTY2D1-AS1A0A0U1RR47 76 aa16.45■□□□□ 0.22
SCLT1-204ENST00000503215 EEF2KO00418 725 aaKnown RBP16.45■□□□□ 0.22
SCLT1-204ENST00000503215 IGSF6O95976 241 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms