RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 HOXA2O43364 376 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 CCNT2O60583 730 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 ANXA6P08133 673 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 CLCN5P51795 746 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 PROSER1Q86XN7 944 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 DQX1Q8TE96 717 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 FAM84AQ96KN4 292 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 RHOBTB2Q9BYZ6 727 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 LSM3P62310 102 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 LRRC74AQ0VAA2 488 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 RALGDSQ12967 914 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 ARL13AQ5H913 290 aaPredicted RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 PPM1JQ5JR12 505 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 FBXO47Q5MNV8 452 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 METTL7BQ6UX53 244 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 CENPNQ96H22 339 aaPredicted RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 MUC13Q9H3R2 512 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 CAB39LQ9H9S4 337 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 A0A087WZ62 844 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 CDK9P50750 372 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 ZBED5Q49AG3 693 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 CLYBLQ8N0X4 340 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 ALG9Q9H6U8 611 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 TMEM216Q9P0N5 145 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 DPP7Q9UHL4 492 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 IGLV3-22A0A075B6J6 115 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 KCNU1A8MYU2 1149 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PRR23D1E9PI22 279 aaPredicted RBP17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PRR23D2P0DMB1 279 aaPredicted RBP17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 ACADVLP49748 655 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PDZK1Q5T2W1 519 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 VSIG10LQ86VR7 867 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 FBXO30Q8TB52 745 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 ADI1Q9BV57 179 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 CENPXA8MT69 81 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PDE9AO76083 593 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 ERBB2P04626 1255 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.375e-7■□□□□ 10.6
HMGXB3-201ENST00000502717 OAZ1P54368 228 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 SPESP1Q6UW49 350 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 XYLT1Q86Y38 959 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 KBTBD8Q8NFY9 601 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 CPB2Q96IY4 423 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 TAS2R13Q9NYV9 303 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 CXCL11O14625 94 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 IL12AP29459 219 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 C1DQ13901 141 aaKnown RBP17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 UGCGQ16739 394 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 TMEM126BQ8IUX1 230 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 DNERQ8NFT8 737 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 METTL6Q8TCB7 284 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 GATA5Q9BWX5 397 aaPredicted RBP17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 CCNB1IP1Q9NPC3 277 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PRRG1O14668 218 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 NOS2P35228 1153 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 LIMK2P53671 638 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PLCL1Q15111 1095 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 ZYG11AQ6WRX3 759 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 LRRN4Q8WUT4 740 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 POP5Q969H6 163 aaKnown RBP17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 NT5MQ9NPB1 228 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 STARD7Q9NQZ5 370 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
HMGXB3-201ENST00000502717 PAPSS1O43252 624 aaPredicted RBP17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 TGFB3P10600 412 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 TP53BP2Q13625 1128 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CCNYL2Q5T2Q4 361 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 THAP5Q7Z6K1 395 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 DENND1AQ8TEH3 1009 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 C17orf50Q8WW18 174 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 PROX1Q92786 737 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CPXM1Q96SM3 734 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 TRAF6Q9Y4K3 522 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 GCATO75600 419 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CSH1P0DML2 217 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CSH2P0DML3 217 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 HGFP14210 728 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 IDO1P14902 403 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 MAP3K7CLP57077 242 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 TTLL9Q3SXZ7 439 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 ZNF384Q8TF68 577 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 RAB2BQ8WUD1 216 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 FDXACB1Q9BRP7 624 aaPredicted RBP17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 NUDT5Q9UKK9 219 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 KPNA6O60684 536 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 GOT1P17174 413 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 C4BPBP20851 252 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 CCR1P32246 355 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 MAGEA8P43361 318 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 RPS9P46781 194 aaKnown RBP17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 PRIM2P49643 509 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 RENBPP51606 427 aa17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 FSCN1Q16658 493 aaKnown RBP17.35■□□□□ 0.37
HMGXB3-201ENST00000502717 SLC35G1Q2M3R5 365 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms