RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
HDLBP-246ENST00000496569 FBXL19Q6PCT2 694 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 SYN2Q92777 582 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-246ENST00000496569 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 PPP1R16AQ96I34 528 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 NSMCE3Q96MG7 304 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 CALN1Q9BXU9 219 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 GDF3Q9NR23 364 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDLBP-246ENST00000496569 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 TOR4AQ9NXH8 423 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 UBA2Q9UBT2 640 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-246ENST00000496569 KNTC1P50748 2209 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 CFAP47Q6ZTR5 3102 aa12.39□□□□□ -0.43
HDLBP-246ENST00000496569 IGLON5A6NGN9 336 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 PRAMEF26H0Y7S4 382 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 MUSKO15146 869 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 PRAMEF11O60813 436 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 IGSF6O95976 241 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 PAK4O96013 591 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 CYP1A2P05177 515 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 CD48P09326 243 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 THEGLP0DJG4 465 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 RARAP10276 462 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 EPHA8P29322 1005 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 ADKP55263 362 aaKnown RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 DNAJC3Q13217 504 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 DPYSQ14117 519 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 STAT4Q14765 748 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 ATP13A4Q4VNC1 1196 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 ZNF805Q5CZA5 627 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 ZNF542PQ5EBM4 170 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 TPRG1LQ5T0D9 272 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 GDPD4Q6W3E5 623 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 DBX2Q6ZNG2 339 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 ZSWIM9Q86XI8 627 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 SLC22A18ASQ8N1D0 253 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 MFSD2AQ8NA29 543 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 CHP1Q99653 195 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 TMEM121BQ9BXQ6 578 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 PCDH18Q9HCL0 1135 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
HDLBP-246ENST00000496569 DMTF1Q9Y222 760 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 COQ6Q9Y2Z9 468 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 PCDHGB2Q9Y5G2 931 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 ASXL3Q9C0F0 2248 aa12.38□□□□□ -0.43
HDLBP-246ENST00000496569 POM121BA6NF01 834 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 ARHGAP42A6NI28 874 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 TMEM110-MUSTN1A8MSY1 372 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 KRT37O76014 449 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 POP4O95707 220 aaKnown RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 HNRNPA2B1P22626 353 aaKnown RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 NDST2P52849 883 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 SLC45A4Q5BKX6 768 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 FAM182AQ5T1J6 154 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 AFMIDQ63HM1 303 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 PTAR1Q7Z6K3 402 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 RAB44Q7Z6P3 723 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 VPS36Q86VN1 386 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 EID2Q8N6I1 236 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 SAP25Q8TEE9 199 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 KLHDC7BQ96G42 594 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 BMFQ96LC9 184 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 CSPG4P5Q96PW8 444 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 NCAPGQ9BPX3 1015 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 WRAP53Q9BUR4 548 aaKnown RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 SP110Q9HB58 689 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.434e-8■□□□□ 9
HDLBP-246ENST00000496569 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
HDLBP-246ENST00000496569 RP1P56715 2156 aa12.37□□□□□ -0.43
HDLBP-246ENST00000496569 APC2O95996 2303 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 H3BRJ5 948 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 NEMP1O14524 444 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 PCDHGA12O60330 932 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 BUB1BO60566 1050 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-246ENST00000496569 MMP20O60882 483 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 ITGAVP06756 1048 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 TIMP2P16035 220 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 AKT2P31751 481 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 PCK1P35558 622 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 IGFALSP35858 605 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 GRK6P43250 576 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 TAS2R40P59535 323 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 DPYSL2Q16555 572 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 ST3GAL2Q16842 350 aa12.36□□□□□ -0.43
HDLBP-246ENST00000496569 ASTE1Q2TB18 679 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-246ENST00000496569 INO80DQ53TQ3 878 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms