RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ABCA7Q8IZY2 2146 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 C16orf96A6NNT2 1141 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 APOC4-APOC2K7ER74 178 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 PPP1R12AO14974 1030 aaPredicted RBP19.67■□□□□ 0.74
HDAC4-212ENST00000495497 APOC2P02655 101 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 HLA-DQB2P05538 268 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ITGB7P26010 798 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ADPRHP54922 357 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ZNF33AQ06730 810 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ITKQ08881 620 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 CCDC6Q16204 474 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ZNF805Q5CZA5 627 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 LAIR1Q6GTX8 287 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 NCEH1Q6PIU2 408 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ERN2Q76MJ5 926 aaKnown RBP19.67■□□□□ 0.74
HDAC4-212ENST00000495497 BBS5Q8N3I7 341 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 DCLK2Q8N568 766 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 FAM131CQ96AQ9 280 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 FAM122AQ96E09 287 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 PPP1R16AQ96I34 528 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 LRIG1Q96JA1 1093 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 HSPA12BQ96MM6 686 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 MGME1Q9BQP7 344 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 TLR10Q9BXR5 811 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 CPEB1Q9BZB8 566 aaKnown RBP19.67■□□□□ 0.74
HDAC4-212ENST00000495497 ARRDC1-AS1Q9H2J1 176 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 TTLL3Q9Y4R7 772 aa19.67■□□□□ 0.74
HDAC4-212ENST00000495497 TCRBV7S2A1N4TA0A589 114 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 KCNK3O14649 394 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 CR2P20023 1033 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 MAOBP27338 520 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 TAS2R38P59533 333 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 OTUD4Q01804 1114 aaKnown RBP19.66■□□□□ 0.74
HDAC4-212ENST00000495497 LRRC73Q5JTD7 316 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 ZNF569Q5MCW4 686 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 BZW1Q7L1Q6 419 aaKnown RBP19.66■□□□□ 0.74
HDAC4-212ENST00000495497 ACTL9Q8TC94 416 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 FATE1Q969F0 183 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 NUDCD1Q96RS6 583 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 OSBPL1AQ9BXW6 950 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 HDAC8Q9BY41 377 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 SUV39H2Q9H5I1 410 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 NOD2Q9HC29 1040 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 SCUBE2Q9NQ36 999 aa19.66■□□□□ 0.74
HDAC4-212ENST00000495497 ATXN2Q99700 1313 aaKnown RBP19.66■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3DA0A087WVF3 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3IA0A087WXS9 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3EA0A087X179 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3KA0A087X1G2 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3FA6NER0 549 aaPredicted RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3LB9A6J9 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ENC1O14682 589 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 PLRG1O43660 514 aaKnown RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 NEBLO76041 1014 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TJP3O95049 919 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 FSBPO95073 299 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 EPN2O95208 641 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3HP0C7X1 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ADRB3P13945 408 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ITIH2P19823 946 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ITPKAP23677 461 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 HSPA9P38646 679 aaKnown RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ABL2P42684 1182 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 NEK3P51956 506 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 IFI35P80217 286 aaPredicted RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 CREB5Q02930 508 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 PRKD1Q15139 912 aaPredicted RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 NOMO1Q15155 1222 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 SEL1L2Q5TEA6 688 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 LYSMD4Q5XG99 296 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3GQ6DHY5 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3CQ6IPX1 549 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 FBXL19Q6PCT2 694 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ZSWIM9Q86XI8 627 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TBC1D3Q8IZP1 549 aaPredicted RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 SLC35F6Q8N357 371 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 CNTD1Q8N815 330 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 OR2T34Q8NGX1 318 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 TFB1MQ8WVM0 346 aaKnown RBP19.65■□□□□ 0.74
HDAC4-212ENST00000495497 IL12RB2Q99665 862 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 BRD8Q9H0E9 1235 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 NCDNQ9UBB6 729 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 GMEB2Q9UKD1 530 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 ATP8A1Q9Y2Q0 1164 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 PCDHGC4Q9Y5F7 938 aa19.65■□□□□ 0.74
HDAC4-212ENST00000495497 PLXND1Q9Y4D7 1925 aa19.64■□□□□ 0.74
HDAC4-212ENST00000495497 LRRC72A6NJI9 287 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 METTL12A8MUP2 240 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 MEI4A8MW99 385 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 H7C0C1 242 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 SLC7A4O43246 635 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 TIMP2P16035 220 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 PLA2G5P39877 138 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 ATP5OP48047 213 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 AP1S1P61966 158 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 PPP2CBP62714 309 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 PPP2CAP67775 309 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 DSC2Q02487 901 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 BCL2L1Q07817 233 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 NIPAL4Q0D2K0 466 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms