RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 EPOP01588 193 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 HLA-DQB2P05538 268 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CKMP06732 381 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 SERPINF2P08697 491 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CEBPBP17676 345 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 KRT4P19013 534 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 GCAP28676 217 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 SPRP35270 261 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CCR2P41597 374 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CCT5P48643 541 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 NTHL1P78549 312 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 DMTNQ08495 405 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 TDGQ13569 410 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 HTR4Q13639 388 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CRYMQ14894 314 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 TEAD2Q15562 447 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 FAM133BQ5BKY9 247 aaKnown RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 RALGPS1Q5JS13 557 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MPP7Q5T2T1 576 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 UBAP2Q5T6F2 1119 aaKnown RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 GPR158Q5T848 1215 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 HTR3DQ70Z44 454 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 TMEM135Q86UB9 458 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 RASSF3Q86WH2 238 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 IGDCC3Q8IVU1 814 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MFSD6LQ8IWD5 586 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 TRIM42Q8IWZ5 723 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CYP4X1Q8N118 509 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CPXM2Q8N436 756 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CNTD1Q8N815 330 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ANKS4BQ8N8V4 417 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ANKRD42Q8N9B4 389 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 IPMKQ8NFU5 416 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ITFG1Q8TB96 612 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ZSCAN18Q8TBC5 510 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CALML6Q8TD86 181 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 USP13Q92995 863 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 GRAMD1AQ96CP6 724 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 IFT43Q96FT9 208 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 IMP4Q96G21 291 aaKnown RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CERS2Q96G23 380 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MYADMQ96S97 322 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CPNE1Q99829 537 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MLPHQ9BV36 600 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 FICDQ9BVA6 458 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CINPQ9BW66 212 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 FAM107BQ9H098 131 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 RNF38Q9H0F5 515 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MUC3BQ9H195 1237 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ARNT2Q9HBZ2 717 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ZNF334Q9HCZ1 680 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ATP13A1Q9HD20 1204 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 NDFIP2Q9NV92 336 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 THG1LQ9NWX6 298 aaKnown RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 SYBUQ9NX95 663 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ARHGAP26Q9UNA1 814 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 TBC1D30Q9Y2I9 924 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 ARIH1Q9Y4X5 557 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-214ENST00000495485 CPQQ9Y646 472 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 MIA3Q5JRA6 1907 aa10.39□□□□□ -0.75
HDAC3-214ENST00000495485 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 EBAG9O00559 213 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 COPEO14579 308 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 SLC9A3R1O14745 358 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ATP9BO43861 1147 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TBL1XO60907 577 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 PMPCBO75439 489 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 GLULP15104 373 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 PSMC3P17980 439 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 HLA-DPA1P20036 260 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 SLC6A4P31645 630 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 GP5P40197 560 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 GRIA1P42261 906 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 POLD2P49005 469 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 CSE1LP55060 971 aaKnown RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 FCHO2Q0JRZ9 810 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 MTM1Q13496 603 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 SLC12A1Q13621 1099 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ZSCAN26Q16670 478 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ANKRD20A4Q4UJ75 823 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TXNDC8Q6A555 127 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 PKN3Q6P5Z2 889 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 RFWD3Q6PCD5 774 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TIFABQ6ZNK6 161 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ARHGAP36Q6ZRI8 547 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TMEM150AQ86TG1 271 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ARID3BQ8IVW6 561 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 MPP5Q8N3R9 675 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ARL14EPQ8N8R7 260 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 MAB21L3Q8N8X9 362 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 DNASE1L2Q92874 299 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 IRF7Q92985 503 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ZNF669Q96BR6 464 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 OTUB2Q96DC9 234 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TCEAL4Q96EI5 215 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms