RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SORCS1	Q8WY21	1168 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	IFT43	Q96FT9	208 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	MYO19	Q96H55	970 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	PPP1R16A	Q96I34	528 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	FEM1C	Q96JP0	617 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	GABRG3	Q99928	467 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	HEPH	Q9BQS7	1158 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	ADGRE3	Q9BY15	652 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	TRIM31	Q9BZY9	425 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	EPB41L5	Q9HCM4	733 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	HECA	Q9UBI9	543 aa	Predicted RBP	13.71	□□□□□ -0.21
APTX-231	ENST00000494973	SLCO3A1	Q9UIG8	710 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	ANAPC5	Q9UJX4	755 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	SNX24	Q9Y343	169 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	TTC34	A8MYJ7	566 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SMAD6	O43541	496 aa	Known RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SUN1	O94901	812 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	EPHX1	P07099	455 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	MLN	P12872	115 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	HLA-DPA1	P20036	260 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	IL12RB1	P42701	662 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	RPL21	P46778	160 aa	Known RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SUOX	P51687	545 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SLC7A5	Q01650	507 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	DSC2	Q02487	901 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SIGLEC14	Q08ET2	396 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	MESP2	Q0VG99	397 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	LAMB3	Q13751	1172 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	KCNJ11	Q14654	390 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	NAIF1	Q69YI7	327 aa	Predicted RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	WDR93	Q6P2C0	686 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SIX5	Q8N196	739 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	LRRN4CL	Q8ND94	238 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	OR2A12	Q8NGT7	310 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	CPT1B	Q92523	772 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	SPOCK2	Q92563	424 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	TADA1	Q96BN2	335 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	EXOC2	Q96KP1	924 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	TDRD1	Q9BXT4	1180 aa	Known RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	TNKS2	Q9H2K2	1166 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	DPH5	Q9H2P9	285 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.7	□□□□□ -0.22
APTX-231	ENST00000494973	LTB4R2	Q9NPC1	389 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	GDF3	Q9NR23	364 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	IL36A	Q9UHA7	158 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	MUTYH	Q9UIF7	546 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	C5orf42	Q9H799	3197 aa		13.7	□□□□□ -0.22
APTX-231	ENST00000494973	TCF20	Q9UGU0	1960 aa	Known RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	XIRP2	A4UGR9	3374 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	CHURC1-FNTB	B4DL54	471 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	MUSK	O15146	869 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	RNF40	O75150	1001 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	PPFIA2	O75334	1257 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ZNF821	O75541	412 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	FGF1	P05230	155 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ALAD	P13716	330 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	HOXB2	P14652	356 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	IVD	P26440	423 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	TIE1	P35590	1138 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	NUMB	P49757	651 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ITGA8	P53708	1063 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	NRL	P54845	237 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	SEC13	P55735	322 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ARL4C	P56559	192 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	WNT3A	P56704	352 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	POLR2L	P62875	67 aa	Known RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	SKOR1	P84550	965 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ZXDA	P98168	799 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	CDK18	Q07002	472 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	NIPAL4	Q0D2K0	466 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	CDH17	Q12864	832 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	CAMK2G	Q13555	558 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	UBXN2B	Q14CS0	331 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	MAP9	Q49MG5	647 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	DNAJC21	Q5F1R6	531 aa	Known RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ARMC12	Q5T9G4	340 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	KCTD11	Q693B1	232 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	BRAT1	Q6PJG6	821 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	DPY19L3	Q6ZPD9	716 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	PDIK1L	Q8N165	341 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	PDCD7	Q8N8D1	485 aa	Known RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	NAT8L	Q8N9F0	302 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	TMIE	Q8NEW7	156 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	IPMK	Q8NFU5	416 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	PTPRN2	Q92932	1015 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	UHRF1	Q96T88	793 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	TBL1Y	Q9BQ87	522 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ZDHHC6	Q9H6R6	413 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	TBC1D17	Q9HA65	648 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	NOD2	Q9HC29	1040 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	CACNA2D2	Q9NY47	1150 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	EVL	Q9UI08	416 aa	Predicted RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	DMGDH	Q9UI17	866 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms