RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 HIC2Q96JB3 615 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
CSNK1E-212ENST00000494610 RRN3Q9NYV6 651 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 COX16Q9P0S2 106 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 TRIM10Q9UDY6 481 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 STAP1Q9ULZ2 295 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 TLR6Q9Y2C9 796 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 JRKLQ9Y4A0 524 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 U3KQA8 63 aa12□□□□□ -0.49
CSNK1E-212ENST00000494610 MIF4GDA9UHW6 222 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 GOLGA8SH3BPF8 625 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CAPN9O14815 690 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 YKT6O15498 198 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 KLK10O43240 276 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 BUB1O43683 1085 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 OPA1O60313 960 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 RNGTTO60942 597 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CTSLP07711 333 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 THEGLP0DJG4 465 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CDK4P11802 303 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CASQ1P31415 396 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 ZNF211Q13398 564 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 ILKQ13418 452 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 TUBB2AQ13885 445 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 ELAVL3Q14576 367 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 STAT4Q14765 748 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 SLC45A4Q5BKX6 768 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CDCP2Q5VXM1 449 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CXorf57Q6NSI4 855 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CRTC1Q6UUV9 634 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 FAM183BPQ6ZVS7 135 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 SLC22A18ASQ8N1D0 253 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 FAM181AQ8N9Y4 354 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 KDM1BQ8NB78 822 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 OR13H1Q8NG92 308 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 ALG14Q96F25 216 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 KLHDC7BQ96G42 594 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 MCEEQ96PE7 176 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 TUBB2BQ9BVA1 445 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 METTL5Q9NRN9 209 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 AMFRQ9UKV5 643 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 CAPN6Q9Y6Q1 641 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 SPTA1P02549 2419 aa11.99□□□□□ -0.49
CSNK1E-212ENST00000494610 UBR5O95071 2799 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 A0A1W2PQU0 124 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 TCRBV5S1A1TA0A578 114 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 FAM170AA1A519 330 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 TYW5A2RUC4 315 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 K7ERQ8 282 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 ERVH48-1M5A8F1 160 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 SPOPO43791 374 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 CSO75390 466 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 DAB1O75553 588 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PALMO75781 387 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 MT-CO1P00395 513 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 SDC4P31431 198 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 DLG2Q15700 870 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PIP5KL1Q5T9C9 394 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 SEL1L3Q68CR1 1132 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 BEND5Q7L4P6 421 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PEX26Q7Z412 305 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 C14orf80Q86SX3 495 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 CCDC117Q8IWD4 279 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 SLC35F6Q8N357 371 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 UBL4BQ8N7F7 174 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 NIPA2Q8N8Q9 360 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 LSM14AQ8ND56 463 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 ZNF248Q8NDW4 579 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 OR4C6Q8NH72 309 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 TTC9Q92623 222 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 ARRDC3Q96B67 414 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 APOLD1Q96LR9 279 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 SERPINB11Q96P15 392 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PRMT1Q99873 361 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 CALN1Q9BXU9 219 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 ASCL3Q9NQ33 180 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 DNAI1Q9UI46 699 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PPM1HQ9ULR3 514 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 PAXBP1Q9Y5B6 917 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 SNX10Q9Y5X0 201 aa11.98□□□□□ -0.49
CSNK1E-212ENST00000494610 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 RELNP78509 3460 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 PTPN13Q12923 2485 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 RP1P56715 2156 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 CCDC66A2RUB6 948 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 GRID2IPA4D2P6 1211 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 BUB1BO60566 1050 aaPredicted RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 SNAP91O60641 907 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 PIAS2O75928 621 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 RNF8O76064 485 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 PROSCO94903 275 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TRUB2O95900 331 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 GPD1P21695 349 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TGM2P21980 687 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 PSMA2P25787 234 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 PTPN9P43378 593 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 ZNF143P52747 638 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms