RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 PRICKLE3O43900 615 aaPredicted RBP11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ZG16O60844 167 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
TRIM59-206ENST00000494486 C8BP07358 591 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ADRB3P13945 408 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 COX6B1P14854 86 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 NFKBIAP25963 317 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ALDH4A1P30038 563 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 SSTR2P30874 369 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 DLSTP36957 453 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 PEX5P50542 639 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ITGA1P56199 1179 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 OR1D5P58170 312 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 NUCB2P80303 420 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 MC2RQ01718 297 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 SRSF11Q05519 484 aaKnown RBP11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ALG11Q2TAA5 492 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 SLC6A19Q695T7 634 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 STXBP4Q6ZWJ1 553 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 TMEM135Q86UB9 458 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 BMPERQ8N8U9 685 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 FAM46DQ8NEK8 389 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 OR2A12Q8NGT7 310 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 TSACCQ96A04 125 aaPredicted RBP11.12□□□□□ -0.63
TRIM59-206ENST00000494486 DNAJC19Q96DA6 116 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 DPYSL5Q9BPU6 564 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 TWSG1Q9GZX9 223 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 CHST11Q9NPF2 352 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 ASF1BQ9NVP2 202 aa11.12□□□□□ -0.63
TRIM59-206ENST00000494486 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
TRIM59-206ENST00000494486 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
TRIM59-206ENST00000494486 FAM221AA4D161 298 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 ZSCAN5CA6NGD5 496 aaPredicted RBP11.11□□□□□ -0.63
TRIM59-206ENST00000494486 YJEFN3A6XGL0 299 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 E7ENQ6 273 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 VNN1O95497 513 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 DLGAP3O95886 979 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 THRAP10827 490 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 CD1CP29017 333 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 IGFALSP35858 605 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 ASPAP45381 313 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 NUMBP49757 651 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 SQSTM1Q13501 440 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 NR1D2Q14995 579 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 TCEA2Q15560 299 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 RILPL1Q5EBL4 403 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 LYSMD3Q7Z3D4 306 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 LGI2Q8N0V4 545 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 IQCKQ8N0W5 287 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 GLIS1Q8NBF1 620 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 IPO9Q96P70 1041 aaKnown RBP11.11□□□□□ -0.63
TRIM59-206ENST00000494486 RBM15Q96T37 977 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■■□□ 15.2
TRIM59-206ENST00000494486 FGFBP2Q9BYJ0 223 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 TRIM8Q9BZR9 551 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 LRRC4Q9HBW1 653 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 FBXO8Q9NRD0 319 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 RCOR3Q9P2K3 495 aaPredicted RBP11.11□□□□□ -0.63
TRIM59-206ENST00000494486 IL36AQ9UHA7 158 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 CROCCQ5TZA2 2017 aa11.11□□□□□ -0.63
TRIM59-206ENST00000494486 PIPSLA2A3N6 862 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 RHPN2P1A8MT19 583 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 RNF103O00237 685 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
TRIM59-206ENST00000494486 TNFP01375 233 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 HTR1BP28222 390 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 L1CAMP32004 1257 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 SRP54P61011 504 aaKnown RBP11.1□□□□□ -0.63
TRIM59-206ENST00000494486 CHRNA6Q15825 494 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 RHOT1Q8IXI2 618 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 ANKRD52Q8NB46 1076 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 ATL2Q8NHH9 583 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 ALG14Q96F25 216 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 MDFIQ99750 246 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 CTRCQ99895 268 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 FEM1AQ9BSK4 669 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 C1QTNF7Q9BXJ2 289 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 DPEP2Q9H4A9 486 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 HS3ST2Q9Y278 367 aa11.1□□□□□ -0.63
TRIM59-206ENST00000494486 NEMP1O14524 444 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 KATNA1O75449 491 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 LEFTY1O75610 366 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 CREG1O75629 220 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 SRCP12931 536 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 STAT1P42224 750 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 GPR3P46089 330 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 CCL11P51671 97 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 CLDN10P78369 228 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 CDK18Q07002 472 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 ENPP7Q6UWV6 458 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 TAOK1Q7L7X3 1001 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 VPS36Q86VN1 386 aa11.09□□□□□ -0.63
TRIM59-206ENST00000494486 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
TRIM59-206ENST00000494486 SCML4Q8N228 414 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms