RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 PLAC1Q9HBJ0 212 aa12.82□□□□□ -0.36
VPS52-220ENST00000493674 PRKAG3Q9UGI9 489 aa12.82□□□□□ -0.36
VPS52-220ENST00000493674 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
VPS52-220ENST00000493674 BPTFQ12830 3046 aa12.82□□□□□ -0.36
VPS52-220ENST00000493674 MUC3AQ02505 3323 aa12.82□□□□□ -0.36
VPS52-220ENST00000493674 C2CD4DB7Z1M9 353 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 K7ERQ8 282 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 AP3B1O00203 1094 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 INSIG1O15503 277 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ATP9BO43861 1147 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 USP12O75317 370 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 GSRP00390 522 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 EPOP01588 193 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ASLP04424 464 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
VPS52-220ENST00000493674 GDI1P31150 447 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ELK3P41970 407 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 LMAN1P49257 510 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 STK19P49842 368 aaPredicted RBP12.81□□□□□ -0.36
VPS52-220ENST00000493674 AP1S1P61966 158 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ECT2LQ008S8 904 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 MESP2Q0VG99 397 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 NR1H3Q13133 447 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 MSLNQ13421 630 aaPredicted RBP12.81□□□□□ -0.36
VPS52-220ENST00000493674 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
VPS52-220ENST00000493674 KYNUQ16719 465 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 PTPRNQ16849 979 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 STEAP4Q687X5 459 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 GRAMD4Q6IC98 578 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 C22orf39Q6P5X5 142 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 NCEH1Q6PIU2 408 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 NAT16Q8N8M0 369 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 FBXO36Q8NEA4 188 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 IPMKQ8NFU5 416 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 OR52K1Q8NGK4 314 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 FICDQ9BVA6 458 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 NOD2Q9HC29 1040 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 TRPV5Q9NQA5 729 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 UBP1Q9NZI7 540 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 SLC25A13Q9UJS0 675 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 ERVW-1Q9UQF0 538 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 FCF1Q9Y324 198 aaKnown RBP12.81□□□□□ -0.36
VPS52-220ENST00000493674 PIKFYVEQ9Y2I7 2098 aa12.81□□□□□ -0.36
VPS52-220ENST00000493674 TTC24A2A3L6 582 aaPredicted RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 AGPSO00116 658 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 PMPCBO75439 489 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 AGTP01019 485 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 C1QAP02745 245 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 SERPINF2P08697 491 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 BMP1P13497 986 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 POLR2EP19388 210 aaKnown RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 SLC6A11P48066 632 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 NPY2RP49146 381 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 GPX6P59796 221 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 RHOAP61586 193 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 ITKQ08881 620 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 CDH17Q12864 832 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 EIF4HQ15056 248 aaKnown RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 DGKKQ5KSL6 1271 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 SRLQ86TD4 932 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 MPP5Q8N3R9 675 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 PCDH20Q8N6Y1 951 aaKnown RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 TERB1Q8NA31 727 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 ATP11CQ8NB49 1132 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 KDM1BQ8NB78 822 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 NXPE3Q969Y0 559 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 EXOC2Q96KP1 924 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 EBNA1BP2Q99848 306 aaKnown RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 TMEM109Q9BVC6 243 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 PHF7Q9BWX1 381 aaPredicted RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 TDRD1Q9BXT4 1180 aaKnown RBP12.8□□□□□ -0.36
VPS52-220ENST00000493674 SYBUQ9NX95 663 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 GTSE1Q9NYZ3 720 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 DEC1Q9P2X7 70 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 CHMP2BQ9UQN3 213 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 PLAAQ9Y263 795 aa12.8□□□□□ -0.36
VPS52-220ENST00000493674 SDR42E2A6NKP2 422 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 FZD6O60353 706 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 SPAG6O75602 509 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 IGSF6O95976 241 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 PRLP01236 227 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 GSTA2P09210 222 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 DLDP09622 509 aaKnown RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
VPS52-220ENST00000493674 HLA-DPA1P20036 260 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 MGAT1P26572 445 aa12.79□□□□□ -0.36
VPS52-220ENST00000493674 MAPK8P45983 427 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms