RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 UBA2Q9UBT2 640 aaPredicted RBP14.21□□□□□ -0.14
PTPN7-216ENST00000492977 GREM1O60565 184 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 TSPAN3O60637 253 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 IL1BP01584 269 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 MPOP05164 745 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 SERPINF2P08697 491 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 NEFHP12036 1026 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 GABRR2P28476 465 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 CDC25CP30307 473 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 BMPR1AP36894 532 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 CHRNA4P43681 627 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 POLD2P49005 469 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 SGSHP51688 502 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
PTPN7-216ENST00000492977 LAMB3Q13751 1172 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 FSTL4Q6MZW2 842 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 ESRP1Q6NXG1 681 aaKnown RBP14.2□□□□□ -0.14
PTPN7-216ENST00000492977 Q6ZNB5 142 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 GAREM2Q75VX8 874 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 RTL10Q7L3V2 364 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 TMC8Q8IU68 726 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 FAM217AQ8IXS0 508 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 DCLK2Q8N568 766 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 SLC25A41Q8N5S1 370 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
PTPN7-216ENST00000492977 KREMEN2Q8NCW0 462 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 GABPB2Q8TAK5 448 aaPredicted RBP14.2□□□□□ -0.14
PTPN7-216ENST00000492977 RAB3IL1Q8TBN0 382 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 ADAMTS19Q8TE59 1207 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 HERVK_113Q902F9 699 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 CCT6BQ92526 530 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 SLC22A12Q96S37 553 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 SLCO1B3Q9NPD5 702 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 KLHL14Q9P2G3 628 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 ZNF510Q9Y2H8 683 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 CPQQ9Y646 472 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 DENND4CQ5VZ89 1909 aa14.2□□□□□ -0.14
PTPN7-216ENST00000492977 TYW5A2RUC4 315 aaKnown RBP14.19□□□□□ -0.14
PTPN7-216ENST00000492977 GFRA2O00451 464 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 MUSKO15146 869 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 VAPBO95292 243 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 C8AP07357 584 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 GSTA1P08263 222 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 HLA-DPA1P20036 260 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 SLC7A9P82251 487 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 CDK18Q07002 472 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 SEPT6Q14141 434 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 IHHQ14623 411 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 CNGA3Q16281 694 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 SIRPB2Q5JXA9 342 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 TSTD2Q5T7W7 516 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 RNF219Q5W0B1 726 aaPredicted RBP14.19□□□□□ -0.14
PTPN7-216ENST00000492977 RNF43Q68DV7 783 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 CXorf57Q6NSI4 855 aaKnown RBP14.19□□□□□ -0.14
PTPN7-216ENST00000492977 OTOAQ7RTW8 1153 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 CCDC63Q8NA47 563 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 ARMC2Q8NEN0 867 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 TMA16Q96EY4 203 aaKnown RBP14.19□□□□□ -0.14
PTPN7-216ENST00000492977 IFT43Q96FT9 208 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 TCF25Q9BQ70 676 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 FAM167BQ9BTA0 163 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 CINPQ9BW66 212 aaPredicted RBP14.19□□□□□ -0.14
PTPN7-216ENST00000492977 RHOJQ9H4E5 214 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 SNX15Q9NRS6 342 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 PCDH10Q9P2E7 1040 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 LSM7Q9UK45 103 aaKnown RBP14.19□□□□□ -0.14
PTPN7-216ENST00000492977 SLC4A7Q9Y6M7 1214 aa14.19□□□□□ -0.14
PTPN7-216ENST00000492977 MROH6A6NGR9 719 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 TLL1O43897 1013 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 TBL1XO60907 577 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 GLUD1P00367 558 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 C1RP00736 705 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 FGF1P05230 155 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 ATXN1LP0C7T5 689 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 EN2P19622 333 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 ARNTP27540 789 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 ERVFC1P60507 584 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 THOC5Q13769 683 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 SMAD1Q15797 465 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 LACTB2Q53H82 288 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 FYB2Q5VWT5 728 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 ATG16L1Q676U5 607 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 HTR3DQ70Z44 454 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 TRPM8Q7Z2W7 1104 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 ZC3HC1Q86WB0 502 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 MRPL43Q8N983 215 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 CALML6Q8TD86 181 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 PTPRN2Q92932 1015 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 PEX13Q92968 403 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 GCNAQ96QF7 691 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 GPR22Q99680 433 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 MUC3BQ9H195 1237 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 ALG13Q9NP73 1137 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 SIRPGQ9P1W8 387 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 SLC2A6Q9UGQ3 507 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 MTO1Q9Y2Z2 717 aaKnown RBP14.18□□□□□ -0.14
PTPN7-216ENST00000492977 RWDD3Q9Y3V2 267 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 MYLKQ15746 1914 aa14.18□□□□□ -0.14
PTPN7-216ENST00000492977 TRAV19A0A0A6YYK7 116 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms