RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
USF1-206ENST00000491629 PADI4Q9UM07 663 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 PCDHGA7Q9Y5G6 932 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 SPTAN1Q13813 2472 aaKnown RBP13.45□□□□□ -0.26
USF1-206ENST00000491629 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 AREL1O15033 823 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 SUV39H1O43463 412 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
USF1-206ENST00000491629 SLC9A1P19634 815 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 ITIH2P19823 946 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 OR1E1P30953 314 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 SPIDRQ14159 915 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 ARHGAP44Q17R89 818 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 RAB6CQ53S08 254 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 LRRC73Q5JTD7 316 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 BRMS1LQ5PSV4 323 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 KLHL10Q6JEL2 608 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 BNIPLQ7Z465 357 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 KYQ8NBH2 561 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 DENND6BQ8NEG7 585 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 SHC3Q92529 594 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 NAT6Q93015 286 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 PGAP3Q96FM1 320 aaPredicted RBP13.44□□□□□ -0.26
USF1-206ENST00000491629 C1orf74Q96LT6 269 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 SPON2Q9BUD6 331 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 TM6SF2Q9BZW4 377 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 CEP44Q9C0F1 390 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 RAB6CQ9H0N0 254 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 ACSL6Q9UKU0 697 aa13.44□□□□□ -0.26
USF1-206ENST00000491629 FAM170AA1A519 330 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 D6RAR5 112 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
USF1-206ENST00000491629 TSPAN6O43657 245 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 SMC2O95347 1197 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 FAM87AP0C7U9 286 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
USF1-206ENST00000491629 CLCN1P35523 988 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 ACVRL1P37023 503 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 RECQLP46063 649 aaPredicted RBP13.43□□□□□ -0.26
USF1-206ENST00000491629 DNA2P51530 1060 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 STX17P56962 302 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 CCL7P80098 99 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 SGCGQ13326 291 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 MTA1Q13330 715 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 FOXR2Q6PJQ5 311 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 RAB11FIP2Q7L804 512 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 VPS36Q86VN1 386 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 LURAP1LQ8IV03 231 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 FBXO39Q8N4B4 442 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 WDR48Q8TAF3 677 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 HTR3CQ8WXA8 447 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 CCDC74AQ96AQ1 378 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 SGF29Q96ES7 293 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 TBATAQ96M53 351 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 EPB41L5Q9HCM4 733 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 ATP13A1Q9HD20 1204 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 HECAQ9UBI9 543 aaPredicted RBP13.43□□□□□ -0.26
USF1-206ENST00000491629 CTNND2Q9UQB3 1225 aa13.43□□□□□ -0.26
USF1-206ENST00000491629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
USF1-206ENST00000491629 MMP20O60882 483 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SRGAP2O75044 1071 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 ANXA6P08133 673 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 FLT3P36888 993 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 USP8P40818 1118 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 ETV5P41161 510 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SULT1E1P49888 294 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 RNASE9P60153 205 aaKnown RBP13.42□□□□□ -0.26
USF1-206ENST00000491629 GNA12Q03113 381 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SLC20A2Q08357 652 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 TCEA2Q15560 299 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 ZNF805Q5CZA5 627 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 MACC1Q6ZN28 852 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 USP53Q70EK8 1073 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 TMPRSS9Q7Z410 1059 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 VASH2Q86V25 355 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SLC47A2Q86VL8 602 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SFTPA2Q8IWL1 248 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SDR16C5Q8N3Y7 309 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
USF1-206ENST00000491629 PCDH19Q8TAB3 1148 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 FUBP1Q96AE4 644 aaKnown RBP13.42□□□□□ -0.26
USF1-206ENST00000491629 SRRTQ9BXP5 876 aaKnown RBP13.42□□□□□ -0.26
USF1-206ENST00000491629 MAGEB5Q9BZ81 275 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SYNDIG1Q9H7V2 258 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 SIX2Q9NPC8 291 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.42□□□□□ -0.26
USF1-206ENST00000491629 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
USF1-206ENST00000491629 SIRPGQ9P1W8 387 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 GULP1Q9UBP9 304 aa13.42□□□□□ -0.26
USF1-206ENST00000491629 HEMK1Q9Y5R4 338 aaPredicted RBP13.42□□□□□ -0.26
USF1-206ENST00000491629 AGRPO00253 132 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 GJB6O95452 261 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 ITGB2P05107 769 aa13.41□□□□□ -0.26
USF1-206ENST00000491629 UGT2B4P06133 528 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms