RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ISXQ2M1V0 245 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 LRRC73Q5JTD7 316 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 CCDC185Q8N715 623 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 GPT2Q8TD30 523 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 RXFP2Q8WXD0 754 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 PCDHB18PQ96TA0 734 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 BOCQ9BWV1 1114 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 CLPBQ9H078 707 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 POLR1BQ9H9Y6 1135 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 MBNL1Q9NR56 388 aaKnown RBP15.8■□□□□ 0.12
COL2A1-207ENST00000490609 TMEM248Q9NWD8 314 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 DNAI1Q9UI46 699 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 ENTPD2Q9Y5L3 495 aa15.8■□□□□ 0.12
COL2A1-207ENST00000490609 TLN1Q9Y490 2541 aaKnown RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 EME2A4GXA9 379 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 NEMP2A6NFY4 417 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 EIF4E1BA6NMX2 242 aaKnown RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 AQP9O43315 295 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 LRIG2O94898 1065 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 PLA2G2AP14555 144 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 RHOQP17081 205 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 JUNDP17535 347 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 MMP8P22894 467 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 IGFALSP35858 605 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 RECQLP46063 649 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 RABIFP47224 123 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 HDAC4P56524 1084 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 DEFB133Q30KQ1 61 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 MYLK3Q32MK0 819 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 ZNF805Q5CZA5 627 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 ATXN7L2Q5T6C5 722 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 ZCCHC8Q6NZY4 707 aaKnown RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 IGF2-ASQ6U949 168 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 PARGQ86W56 976 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 ZNF248Q8NDW4 579 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 SLC30A5Q8TAD4 765 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 FUBP1Q96AE4 644 aaKnown RBP15.79■□□□□ 0.12
COL2A1-207ENST00000490609 ATXN7L3BQ96GX2 97 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 DEPDC7Q96QD5 511 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 DUSP23Q9BVJ7 150 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 SEMA4CQ9C0C4 833 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 USP29Q9HBJ7 922 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 TMEM51Q9NW97 253 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 PAXBP1Q9Y5B6 917 aa15.79■□□□□ 0.12
COL2A1-207ENST00000490609 MAST4O15021 2626 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 TSPAN6O43657 245 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 GSRP00390 522 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 UGT2B4P06133 528 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 CELA2BP08218 269 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 ALPPL2P10696 532 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 UNGP13051 313 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 TIMP2P16035 220 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 ERCC5P28715 1186 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 JAM2P57087 298 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 PCBP4P57723 403 aaKnown RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 ERVPABLB-1P60509 514 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 C1orf61Q13536 156 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 CDO1Q16878 200 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 KCTD16Q68DU8 428 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 CRTC1Q6UUV9 634 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 EFL1Q7Z2Z2 1120 aaKnown RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 SLC35F3Q8IY50 421 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 PYROXD2Q8N2H3 581 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 TP53I13Q8NBR0 393 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 OR2AP1Q8NGE2 309 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 MAPK15Q8TD08 544 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 SNRNP27Q8WVK2 155 aaKnown RBP15.78■□□□□ 0.12
COL2A1-207ENST00000490609 KLHL32Q96NJ5 620 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 SLC46A1Q96NT5 459 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 PDCL3Q9H2J4 239 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 CLSTN2Q9H4D0 955 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 SALL4Q9UJQ4 1053 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 SATB2Q9UPW6 733 aa15.78■□□□□ 0.12
COL2A1-207ENST00000490609 FLNCQ14315 2725 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 TCRBV5S1A1TA0A578 114 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 CPED1A4D0V7 1026 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 FPGTO14772 594 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 TPP1O14773 563 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 INSIG1O15503 277 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 KDELR3O43731 214 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 MMP20O60882 483 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 PLEKP08567 350 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-207ENST00000490609 PTPN9P43378 593 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 MAPKAPK2P49137 400 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 CDR2Q01850 454 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 TCP11X2Q5H9J9 407 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 LMX1AQ8TE12 382 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 TTC9Q92623 222 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 RAB7BQ96AH8 199 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 VCPIP1Q96JH7 1222 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 LGMNQ99538 433 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 LRRC61Q9BV99 259 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 MAGEH1Q9H213 219 aa15.77■□□□□ 0.12
COL2A1-207ENST00000490609 CDRT15L2A8MXV6 281 aa15.76■□□□□ 0.11
COL2A1-207ENST00000490609 KRIT1O00522 736 aa15.76■□□□□ 0.11
COL2A1-207ENST00000490609 YY2O15391 372 aa15.76■□□□□ 0.11
COL2A1-207ENST00000490609 GFPT2O94808 682 aa15.76■□□□□ 0.11
COL2A1-207ENST00000490609 POP4O95707 220 aaKnown RBP15.76■□□□□ 0.11
COL2A1-207ENST00000490609 RFC1P35251 1148 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms