RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 HYAL3O43820 417 aaPredicted RBP18.08■□□□□ 0.48
ABCF3-217ENST00000489719 PRAMEF11O60813 436 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 PALMO75781 387 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 TOP3BO95985 862 aaKnown RBP18.08■□□□□ 0.48
ABCF3-217ENST00000489719 FTH1P19P0C7X4 201 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 SPINK2P20155 84 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
ABCF3-217ENST00000489719 RXRGP48443 463 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 GRM3Q14832 879 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 SMTNL2Q2TAL5 461 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 CYP4V2Q6ZWL3 525 aaPredicted RBP18.08■□□□□ 0.48
ABCF3-217ENST00000489719 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.48
ABCF3-217ENST00000489719 GATAD2AQ86YP4 633 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 CHCHD4Q8N4Q1 142 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 FAM174AQ8TBP5 190 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 BTBD6Q96KE9 485 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 CPEB1Q9BZB8 566 aaKnown RBP18.08■□□□□ 0.48
ABCF3-217ENST00000489719 SP110Q9HB58 689 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 BTBD3Q9Y2F9 522 aa18.08■□□□□ 0.48
ABCF3-217ENST00000489719 CACNA1EQ15878 2313 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 GOLGA8CPA6NN73 597 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 TNFSF14O43557 240 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 H2AFZP0C0S5 128 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 THEGLP0DJG4 465 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 RARAP10276 462 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 IL1R2P27930 398 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 DPYSL2Q16555 572 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 HADHQ16836 314 aaKnown RBP18.07■□□□□ 0.48
ABCF3-217ENST00000489719 TMEM259Q4ZIN3 620 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 H2AFVQ71UI9 128 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 NIPA2Q8N8Q9 360 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 PNPLA1Q8N8W4 532 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 TMEM145Q8NBT3 493 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 TEKT4Q8WW24 435 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 FZD3Q9NPG1 666 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.07■□□□□ 0.48
ABCF3-217ENST00000489719 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 WASF3Q9UPY6 502 aa18.07■□□□□ 0.48
ABCF3-217ENST00000489719 IGLON5A6NGN9 336 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 AKR1B10O60218 316 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 AMPD1P23109 780 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 CLDN2P57739 230 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 IL10RBQ08334 325 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 BNIP3Q12983 259 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 DPYSQ14117 519 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 KRT81Q14533 505 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 RFTN1Q14699 578 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-217ENST00000489719 SHBQ15464 509 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 SLC18A3Q16572 532 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 CFAP58Q5T655 872 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 AFMIDQ63HM1 303 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 TMCO3Q6UWJ1 677 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 POLNQ7Z5Q5 900 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 SLCO6A1Q86UG4 719 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 DCP2Q8IU60 420 aaKnown RBP18.06■□□□□ 0.48
ABCF3-217ENST00000489719 VSTM4Q8IW00 320 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 ARHGAP12Q8IWW6 846 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 ZNF564Q8TBZ8 553 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-217ENST00000489719 HCAR2Q8TDS4 363 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 SAP25Q8TEE9 199 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 ADAMTS14Q8WXS8 1223 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 CTNNBL1Q8WYA6 563 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-217ENST00000489719 EXOC2Q96KP1 924 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 DNAJC7Q99615 494 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 CALN1Q9BXU9 219 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 SUV39H2Q9H5I1 410 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 PDFQ9HBH1 243 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 DKK3Q9UBP4 350 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 LHX3Q9UBR4 397 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 FTSJ1Q9UET6 329 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 IPO11Q9UI26 975 aaKnown RBP18.06■□□□□ 0.48
ABCF3-217ENST00000489719 DOCK4Q8N1I0 1966 aa18.06■□□□□ 0.48
ABCF3-217ENST00000489719 SSU72P8A0A1W2PR75 194 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 FPGTO14772 594 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 INSIG1O15503 277 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 LDOC1O95751 146 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 ATXN1LP0C7T5 689 aaKnown RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 TCF4P15884 667 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 TIMP2P16035 220 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 ABL2P42684 1182 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 SUOXP51687 545 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 Q6ZSR6 202 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 RAB44Q7Z6P3 723 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 SRLQ86TD4 932 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 BAHD1Q8TBE0 780 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 CCDC42Q96M95 316 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 ZNF641Q96N77 438 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 LENG8Q96PV6 779 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 CINPQ9BW66 212 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-217ENST00000489719 C1QTNF2Q9BXJ5 285 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 KLHL11Q9NVR0 708 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 UVRAGQ9P2Y5 699 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 NEUROG3Q9Y4Z2 214 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 PCNX2A6NKB5 2137 aa18.05■□□□□ 0.48
ABCF3-217ENST00000489719 A6NNZ2 444 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 EPHA8P29322 1005 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-217ENST00000489719 CSNK1DP48730 415 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 RENBPP51606 427 aa18.04■□□□□ 0.48
ABCF3-217ENST00000489719 NSUN2Q08J23 767 aaKnown RBP eCLIP18.04■□□□□ 0.48
ABCF3-217ENST00000489719 FGL2Q14314 439 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms