RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 MAPK8P45983 427 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 NUMBP49757 651 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 RHOAP61586 193 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 ECT2LQ008S8 904 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 GRM2Q14416 872 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 GEN1Q17RS7 908 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 STEAP4Q687X5 459 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 TMEM215Q68D42 235 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 C12orf40Q86WS4 652 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 ANKMY2Q8IV38 441 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 IGDCC3Q8IVU1 814 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 PLPP6Q8IY26 295 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 PHTF2Q8N3S3 785 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 NAT16Q8N8M0 369 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 EBNA1BP2Q99848 306 aaKnown RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 TMEM109Q9BVC6 243 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 FSD1LQ9BXM9 530 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 IL22Q9GZX6 179 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 NOD2Q9HC29 1040 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 SCUBE2Q9NQ36 999 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 BFARQ9NZS9 450 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 CHMP2BQ9UQN3 213 aa14.33□□□□□ -0.12
VPS26A-205ENST00000489656 FCF1Q9Y324 198 aaKnown RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 ARIH1Q9Y4X5 557 aaPredicted RBP14.33□□□□□ -0.12
VPS26A-205ENST00000489656 A0A087WUV0 522 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 ATP9BO43861 1147 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 USP12O75317 370 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 ACSL3O95573 720 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 IGSF6O95976 241 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 GSRP00390 522 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 CPP00450 1065 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 AGTP01019 485 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 HLA-DPA1P20036 260 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 KCNA5P22460 613 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 MGAT1P26572 445 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 GDI1P31150 447 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 GJA4P35212 333 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 PHBP35232 272 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 CTSOP43234 321 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 GPX6P59796 221 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 OLIG2Q13516 323 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 EIF4HQ15056 248 aaKnown RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 ITPRIPL2Q3MIP1 535 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 UBAP2Q5T6F2 1119 aaKnown RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 C22orf39Q6P5X5 142 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 SRLQ86TD4 932 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 PALM2Q8IXS6 379 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 PCDH20Q8N6Y1 951 aaKnown RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 KDM1BQ8NB78 822 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 NXPE3Q969Y0 559 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 STAMBPL1Q96FJ0 436 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 GUCD1Q96NT3 240 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 RPP25Q9BUL9 199 aaKnown RBP14.32□□□□□ -0.12
VPS26A-205ENST00000489656 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 METRNQ9UJH8 293 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 ERVW-1Q9UQF0 538 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 NUMBLQ9Y6R0 609 aa14.32□□□□□ -0.12
VPS26A-205ENST00000489656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 MAGEB16A2A368 324 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 K7ERQ8 282 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 AGPSO00116 658 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 TRIM24O15164 1050 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 TIMM44O43615 452 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 GJB3O75712 270 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 TCEA3O75764 348 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 FGF1P05230 155 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 ATP5BP06576 529 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 ATXN1LP0C7T5 689 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 PGAM1P18669 254 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 OPRD1P41143 372 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 STK19P49842 368 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 SCNN1BP51168 640 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 CDK18Q07002 472 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 FRG1Q14331 258 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 STAT4Q14765 748 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 SLC1A5Q15758 541 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 PREPLQ4J6C6 727 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 HP1BP3Q5SSJ5 553 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 CYS1Q717R9 158 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 CROCCP2Q86T23 111 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 MPP5Q8N3R9 675 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
VPS26A-205ENST00000489656 EXOC2Q96KP1 924 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 MRGPRX3Q96LB0 322 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 NSMCE3Q96MG7 304 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 RANBP9Q96S59 729 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 RUFY1Q96T51 708 aa14.31□□□□□ -0.12
VPS26A-205ENST00000489656 SH3GL2Q99962 352 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms