RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TCEA3O75764 348 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 TPH1P17752 444 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 STX2P32856 288 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 CTSOP43234 321 aaPredicted RBP21.91■■□□□ 1.1
SMC4-221ENST00000489573 DGKGP49619 791 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 RALGPS1Q5JS13 557 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 CERCAMQ5T4B2 595 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 KDELC2Q7Z4H8 507 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 ADIPOR2Q86V24 386 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 RNF135Q8IUD6 432 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 KRT222Q8N1A0 295 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 GSDMBQ8TAX9 411 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 IFT43Q96FT9 208 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 KXD1Q9BQD3 176 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 PLA2G2FQ9BZM2 168 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 ECT2Q9H8V3 914 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 PLAC1Q9HBJ0 212 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 HPS4Q9NQG7 708 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 RABGEF1Q9UJ41 708 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 HS3ST2Q9Y278 367 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 USP15Q9Y4E8 981 aaPredicted RBP21.91■■□□□ 1.1
SMC4-221ENST00000489573 LOC285095A0A1B0GVY8 99 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 EXOC1LA0A1B0GW35 172 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 TCRBV9S1A1TA0A576 114 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 GOLGA8KD6RF30 607 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 ATP9BO43861 1147 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 PSMC3P17980 439 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 CHRNA4P43681 627 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 CDK18Q07002 472 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 GRM2Q14416 872 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 LONRF1Q17RB8 773 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 KLHL38Q2WGJ6 581 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 MBLAC2Q68D91 279 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 PARM1Q6UWI2 310 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 C12orf40Q86WS4 652 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 ETFBKMTQ8IXQ9 262 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 CPA6Q8N4T0 437 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 SLC25A41Q8N5S1 370 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 WFIKKN2Q8TEU8 576 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 SUSD6Q92537 303 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 TRIM56Q9BRZ2 755 aaKnown RBP21.9■■□□□ 1.1
SMC4-221ENST00000489573 ACSS3Q9H6R3 686 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 OGFRQ9NZT2 677 aa21.9■■□□□ 1.1
SMC4-221ENST00000489573 TLDC2A0PJX2 215 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 SMIM23A6NLE4 172 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 SMAD6O43541 496 aaKnown RBP21.89■■□□□ 1.09
SMC4-221ENST00000489573 ECI2O75521 394 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 EPOP01588 193 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 CISD3P0C7P0 127 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 SRCP12931 536 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 SLC1A5Q15758 541 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 MTSS1LQ765P7 747 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 TTC17Q96AE7 1141 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 ARL8AQ96BM9 186 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 CENPHQ9H3R5 247 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 PPCSQ9HAB8 311 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 SLC27A6Q9Y2P4 619 aa21.89■■□□□ 1.09
SMC4-221ENST00000489573 MAGEB16A2A368 324 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 TRIM24O15164 1050 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 TULP3O75386 442 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 ATXN1LP0C7T5 689 aaKnown RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 POLR2EP19388 210 aaKnown RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 HLA-DPA1P20036 260 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 OAS2P29728 719 aaKnown RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 SLCO1A2P46721 670 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 STK19P49842 368 aaPredicted RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 AP1S1P61966 158 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 ECT2LQ008S8 904 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 NR1H3Q13133 447 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 GEN1Q17RS7 908 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 GAB4Q2WGN9 574 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 TTMPQ5BVD1 217 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 ATXN7L2Q5T6C5 722 aaPredicted RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 NCEH1Q6PIU2 408 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 SRLQ86TD4 932 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 SH2D3CQ8N5H7 860 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 FGF14Q92915 247 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 RPL10LQ96L21 214 aaKnown RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 TDRD1Q9BXT4 1180 aaKnown RBP21.88■■□□□ 1.09
SMC4-221ENST00000489573 TM6SF2Q9BZW4 377 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 EPS15L1Q9UBC2 864 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 SOX13Q9UN79 622 aa21.88■■□□□ 1.09
SMC4-221ENST00000489573 OTOL1A6NHN0 477 aaPredicted RBP21.87■■□□□ 1.09
SMC4-221ENST00000489573 FGF1P05230 155 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 POLBP06746 335 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 CSNK1DP48730 415 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 RUNX3Q13761 415 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 CRYMQ14894 314 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 PCID2Q5JVF3 399 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 SIRPB2Q5JXA9 342 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 SPANXN3Q5MJ09 141 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 ARMC3Q5W041 872 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 PPHLN1Q8NEY8 458 aaKnown RBP21.87■■□□□ 1.09
SMC4-221ENST00000489573 NSMCE3Q96MG7 304 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 CYTH2Q99418 400 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 CEP44Q9C0F1 390 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 FETUBQ9UGM5 382 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 ARIH1Q9Y4X5 557 aaPredicted RBP21.87■■□□□ 1.09
SMC4-221ENST00000489573 RPS6KL1Q9Y6S9 549 aa21.87■■□□□ 1.09
SMC4-221ENST00000489573 FAM237BA0A1B0GVD1 139 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms