RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LENG8Q96PV6 779 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 C11orf70Q9BRQ4 267 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 ZDHHC6Q9H6R6 413 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 TMEM248Q9NWD8 314 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 HECAQ9UBI9 543 aaPredicted RBP11.95□□□□□ -0.5
ACTN4-206ENST00000489451 OR12D3Q9UGF7 316 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 PAXBP1Q9Y5B6 917 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 PTPN13Q12923 2485 aa11.95□□□□□ -0.5
ACTN4-206ENST00000489451 TCRBV5S1A1TA0A578 114 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 PMS2P1A4D2B8 440 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 C16orf96A6NNT2 1141 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 MPOP05164 745 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 RHOQP17081 205 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 TGM2P21980 687 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 IGFALSP35858 605 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
ACTN4-206ENST00000489451 DNA2P51530 1060 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
ACTN4-206ENST00000489451 CDR2Q01850 454 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 ATXN7L2Q5T6C5 722 aaPredicted RBP11.94□□□□□ -0.5
ACTN4-206ENST00000489451 CDKAL1Q5VV42 579 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 GUSBP11Q6P575 273 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 SASS6Q6UVJ0 657 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 RBFAQ8N0V3 343 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 PYROXD2Q8N2H3 581 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 BAP1Q92560 729 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 CENPTQ96BT3 561 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 OSBPL2Q9H1P3 480 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 SIK3Q9Y2K2 1263 aa11.94□□□□□ -0.5
ACTN4-206ENST00000489451 CXorf51AA0A1B0GTR3 108 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 TEX51A0A1B0GUA7 166 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 CSO75390 466 aaKnown RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 GCATO75600 419 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 GSRP00390 522 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 UGT2B4P06133 528 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 GP1BAP07359 652 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 TPM2P07951 284 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 CELA2BP08218 269 aaPredicted RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 PTPN9P43378 593 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 RABIFP47224 123 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 PDX1P52945 283 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 POLR2FP61218 127 aaKnown RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 HNRNPKP61978 463 aaKnown RBP eCLIP11.93□□□□□ -0.55e-12■■■□□ 16
ACTN4-206ENST00000489451 CCDC15Q0P6D6 951 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 PDE1CQ14123 709 aaPredicted RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 KRT31Q15323 416 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 TAF1BQ53T94 588 aaPredicted RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 ZNF805Q5CZA5 627 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 PERM1Q5SV97 790 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 STRADAQ7RTN6 431 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 PARGQ86W56 976 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 ZNF677Q86XU0 584 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 OR2AP1Q8NGE2 309 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 IFI44Q8TCB0 444 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 FAM172AQ8WUF8 416 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 PRR11Q96HE9 360 aaPredicted RBP11.93□□□□□ -0.5
ACTN4-206ENST00000489451 FEM1CQ96JP0 617 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 KLHL32Q96NJ5 620 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 VPS16Q9H269 839 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 TMEM51Q9NW97 253 aa11.93□□□□□ -0.5
ACTN4-206ENST00000489451 ANKRD36A6QL64 1941 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 PES1O00541 588 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 INSIG1O15503 277 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 RRP8O43159 456 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 TSPAN6O43657 245 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 USP12O75317 370 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 TMCC1O94876 653 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 PLEKP08567 350 aaPredicted RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 JUNDP17535 347 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 SDC4P31431 198 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 RFC1P35251 1148 aaPredicted RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 ACTN2P35609 894 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 SOX5P35711 763 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 GABREP78334 506 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 CDKN3Q16667 212 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 DEFB133Q30KQ1 61 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 MYLK3Q32MK0 819 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 KCTD16Q68DU8 428 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 ZCCHC8Q6NZY4 707 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 CRTC1Q6UUV9 634 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 DCP2Q8IU60 420 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 TP53I13Q8NBR0 393 aaPredicted RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 DENND6BQ8NEG7 585 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 ASB12Q8WXK4 309 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 NTAN1Q96AB6 310 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 TBC1D31Q96DN5 1066 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
ACTN4-206ENST00000489451 LRRC61Q9BV99 259 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 DUSP23Q9BVJ7 150 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 BOCQ9BWV1 1114 aa11.92□□□□□ -0.5
ACTN4-206ENST00000489451 CLPBQ9H078 707 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms