RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HYAL3O43820 417 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-232ENST00000489053 PRAMEF11O60813 436 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 H2AFZP0C0S5 128 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 FAM228BP0C875 321 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 ERCC2P18074 760 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 GKP32189 559 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 PBX1P40424 430 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 PAPOLAP51003 745 aaKnown RBP9.25□□□□□ -0.93
HDAC6-232ENST00000489053 RENBPP51606 427 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 SUOXP51687 545 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 THOP1P52888 689 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 SHC2P98077 582 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 CA9Q16790 459 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 ST3GAL2Q16842 350 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 KCNT1Q5JUK3 1230 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 HGSNATQ68CP4 663 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 SEL1L3Q68CR1 1132 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 H2AFVQ71UI9 128 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 GATAD2AQ86YP4 633 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
HDAC6-232ENST00000489053 CNGA4Q8IV77 575 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 MAP7D3Q8IWC1 876 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 KCTD6Q8NC69 237 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF564Q8TBZ8 553 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF830Q96NB3 372 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-232ENST00000489053 SCNM1Q9BWG6 230 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 TRIM7Q9C029 511 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 TRIM5Q9C035 493 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 ERVMER34-1Q9H9K5 563 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 FZD3Q9NPG1 666 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 NEU3Q9UQ49 428 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 FADS3Q9Y5Q0 445 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 PI4KAP42356 2102 aa9.25□□□□□ -0.93
HDAC6-232ENST00000489053 A0A1W2PR77 199 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 IGLON5A6NGN9 336 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF821O75541 412 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 LDOC1O95751 146 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 PAK4O96013 591 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 WNT1P04628 370 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 CYP1A2P05177 515 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 KRT7P08729 469 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 KRT10P13645 584 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 SPINK2P20155 84 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 EPHA8P29322 1005 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 RABIFP47224 123 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 HCAR3P49019 387 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 CDH6P55285 790 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 TAS2R38P59533 333 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 POLR2LP62875 67 aaKnown RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 DAB2P98082 770 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 BCL2L1Q07817 233 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 PTK2BQ14289 1009 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 RFTN1Q14699 578 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 DPYSL2Q16555 572 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF284Q2VY69 593 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 EID2Q8N6I1 236 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 PNPLA1Q8N8W4 532 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 TEKT4Q8WW24 435 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 CNDP2Q96KP4 475 aaKnown RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 PEBP4Q96S96 227 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 ORAI3Q9BRQ5 295 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 WRAP53Q9BUR4 548 aaKnown RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 SLC39A8Q9C0K1 460 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 LUC7LQ9NQ29 371 aaKnown RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 DNAJC28Q9NX36 388 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 CWC15Q9P013 229 aaKnown RBP9.24□□□□□ -0.93
HDAC6-232ENST00000489053 UVRAGQ9P2Y5 699 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 CA5BQ9Y2D0 317 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 NEUROG3Q9Y4Z2 214 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 IGF2RP11717 2491 aa9.24□□□□□ -0.93
HDAC6-232ENST00000489053 KNL1Q8NG31 2342 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 NUMA1Q14980 2115 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ASCC3Q8N3C0 2202 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 FRYQ5TBA9 3013 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 NEMP2A6NFY4 417 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 AKR1B15C9JRZ8 316 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 J3KR12 359 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 WNT9AO14904 365 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 SDC3O75056 442 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 TM7SF2O76062 418 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 IPO7O95373 1038 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 PIGNO95427 931 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 RARAP10276 462 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 CDK4P11802 303 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 HNF1BP35680 557 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 HSPA9P38646 679 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 SCNN1BP51168 640 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 CLDN2P57739 230 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 AP1S1P61966 158 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 HNRNPKP61978 463 aaKnown RBP eCLIP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 FAM193AP78312 1265 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 IL10RBQ08334 325 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ITKQ08881 620 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms