RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CMC1Q7Z7K0 106 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 LCA5Q86VQ0 697 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZNF354CQ86Y25 554 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 FAM217AQ8IXS0 508 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 PLD6Q8N2A8 252 aaKnown RBP6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 TET1Q8NFU7 2136 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 ADAMTS19Q8TE59 1207 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 CLP1Q92989 425 aaKnown RBP6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 VPS39Q96JC1 886 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 FEM1CQ96JP0 617 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 PRICKLE1Q96MT3 831 aaPredicted RBP6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 LRRC37BQ96QE4 947 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 PSKH2Q96QS6 385 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 TRIB3Q96RU7 358 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 SLC22A12Q96S37 553 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 YME1L1Q96TA2 773 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 SEMA3CQ99985 751 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 SPON2Q9BUD6 331 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 MECRQ9BV79 373 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 C1QTNF1Q9BXJ1 281 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 LRRC3Q9BY71 257 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 C20orf27Q9GZN8 174 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 POLR1EQ9GZS1 481 aaKnown RBP6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZBP1Q9H171 429 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZNF395Q9H8N7 513 aaPredicted RBP6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 SEPT3Q9UH03 358 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 GGT7Q9UJ14 662 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 RIMKLBQ9ULI2 386 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 CHKBQ9Y259 395 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 ANKRD6Q9Y2G4 727 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 PCDHB12Q9Y5F1 795 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 CAPN7Q9Y6W3 813 aa6.81□□□□□ -1.32
RN7SL561P-201ENST00000488553 A0A1B0GVM2 712 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 CCDC78A2IDD5 438 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 G3V2L1 256 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 SLC7A4O43246 635 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 TGM5O43548 720 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 LDB2O43679 373 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 GJB3O75712 270 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZMPSTE24O75844 475 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ATP5HO75947 161 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 HAUS5O94927 633 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 S1PR4O95977 384 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 FGBP02675 491 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 RHOCP08134 193 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 SERPINF2P08697 491 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 F7P08709 466 aaPredicted RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 T-ENOLP0DO92 83 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 IRF1P10914 325 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 MBL2P11226 248 aaPredicted RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 FGF3P11487 239 aaPredicted RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 HDCP19113 662 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 CR2P20023 1033 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 HLA-DPA1P20036 260 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 GRK2P25098 689 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 PSMA3P25788 255 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 CRABP2P29373 138 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 SKIV2L2P42285 1042 aaKnown RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ABCG1P45844 678 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 LEPRP48357 1165 aaKnown RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ARFIP2P53365 341 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 NCALDP61601 193 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 IRX4P78413 519 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 SMAD3P84022 425 aaKnown RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 TMPRSS15P98073 1019 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZXDBP98169 803 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ACVR1Q04771 509 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 NSUN2Q08J23 767 aaKnown RBP eCLIP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 LAMB3Q13751 1172 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 THOC5Q13769 683 aaKnown RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZNF235Q14590 738 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 PCLAFQ15004 111 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 DLG2Q15700 870 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 RNF219Q5W0B1 726 aaPredicted RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 TXNDC8Q6A555 127 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 IL31Q6EBC2 164 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 CXorf57Q6NSI4 855 aaKnown RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 Q6ZNB5 142 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 HTR3DQ70Z44 454 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 GALNT7Q86SF2 657 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 MFSD6LQ8IWD5 586 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 DENND6AQ8IWF6 608 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 LMNTD2Q8IXW0 634 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 BBS5Q8N3I7 341 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 TMEM151AQ8N4L1 468 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 FIBCD1Q8N539 461 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 DNAJC5GQ8N7S2 189 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 ARL14EPQ8N8R7 260 aaPredicted RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 OR13J1Q8NGT2 312 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 CALML6Q8TD86 181 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 BRSK1Q8TDC3 778 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 PEX13Q92968 403 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 TMA16Q96EY4 203 aaKnown RBP6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 NSMCE3Q96MG7 304 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 GPR78Q96P69 363 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 MGME1Q9BQP7 344 aa6.8□□□□□ -1.32
RN7SL561P-201ENST00000488553 FAM167BQ9BTA0 163 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms