RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 FEM1CQ96JP0 617 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 RPL10LQ96L21 214 aaKnown RBP11.18□□□□□ -0.62
HDLBP-242ENST00000488013 HEPHQ9BQS7 1158 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 TRIM51Q9BSJ1 452 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 IER2Q9BTL4 223 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 HECAQ9UBI9 543 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-242ENST00000488013 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 DMGDHQ9UI17 866 aaKnown RBP11.18□□□□□ -0.62
HDLBP-242ENST00000488013 SLCO3A1Q9UIG8 710 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 SNX24Q9Y343 169 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 DENND4AQ7Z401 1863 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 XIRP2A4UGR9 3374 aa11.18□□□□□ -0.62
HDLBP-242ENST00000488013 DOCK8Q8NF50 2099 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 KANSL1LA0AUZ9 987 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 K7EQS6 105 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 K7ERQ8 282 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 EIF3HO15372 352 aaKnown RBP eCLIP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 PPFIA2O75334 1257 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 ERLIN1O75477 346 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 ETS1P14921 441 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 HLA-DPA1P20036 260 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 NTSR1P30989 418 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CD86P42081 329 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 MAGEA9P43362 315 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 KIR2DL1P43626 348 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 RPL21P46778 160 aaKnown RBP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 ARL4CP56559 192 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CDK18Q07002 472 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CBLBQ13191 982 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 ERCC6LQ2NKX8 1250 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CFAP58Q5T655 872 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 FSTL4Q6MZW2 842 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 HIBCHQ6NVY1 386 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-242ENST00000488013 NCEH1Q6PIU2 408 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 BRAT1Q6PJG6 821 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 LEKR1Q6ZMV7 388 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CCNJLQ8IV13 435 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 PGBD5Q8N414 524 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 NAT8LQ8N9F0 302 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 TMIEQ8NEW7 156 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 OR2A12Q8NGT7 310 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 LRRN4Q8WUT4 740 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CPT1BQ92523 772 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 ART4Q93070 314 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 PPP1R16AQ96I34 528 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 GABRG3Q99928 467 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 CEP41Q9BYV8 373 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 NOD2Q9HC29 1040 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 STON1Q9Y6Q2 735 aa11.17□□□□□ -0.62
HDLBP-242ENST00000488013 MAGEB16A2A368 324 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 TTC34A8MYJ7 566 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 C1QTNF3-AMACRE9PGA6 284 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 MUSKO15146 869 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ZNF821O75541 412 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 NDST3O95803 873 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 FGF1P05230 155 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ALADP13716 330 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 STK19P49842 368 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ITGA8P53708 1063 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 PLTPP55058 493 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 WNT3AP56704 352 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 MAXP61244 160 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 SKOR1P84550 965 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 DSC2Q02487 901 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ZBTB16Q05516 673 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 NIPAL4Q0D2K0 466 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 CDH17Q12864 832 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 CCINQ13939 588 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 KCNJ11Q14654 390 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 SLMAPQ14BN4 828 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ARMC12Q5T9G4 340 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 KCTD11Q693B1 232 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 LRRC8BQ6P9F7 803 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 DPY19L3Q6ZPD9 716 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 Q6ZVU0 165 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 CENPUQ71F23 418 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 PRPF39Q86UA1 669 aaKnown RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 LRRN4CLQ8ND94 238 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 SORCS1Q8WY21 1168 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 IFT81Q8WYA0 676 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 PRCCQ92733 491 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 LRRC39Q96DD0 335 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 MYO19Q96H55 970 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 ZNF419Q96HQ0 510 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 RBM15Q96T37 977 aaKnown RBP eCLIP11.16□□□□□ -0.62
HDLBP-242ENST00000488013 FMO2Q99518 471 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
HDLBP-242ENST00000488013 TM6SF2Q9BZW4 377 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms