RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 KALRNO60229 2985 aa11.39□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MGAQ8IWI9 3026 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 C16orf96A6NNT2 1141 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 A6NNZ2 444 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RASA4BC9J798 803 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KRIT1O00522 736 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TRIM38O00635 465 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FGF10O15520 208 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RASA4O43374 803 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CREB3O43889 395 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DGKAP23743 735 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZNF165P49910 485 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RPS21P63220 83 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CCDC15Q0P6D6 951 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SERINC3Q13530 473 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ASIC2Q16515 512 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PARP15Q460N3 678 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZNF805Q5CZA5 627 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SCYL2Q6P3W7 929 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FBXL19Q6PCT2 694 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DCUN1D2Q6PH85 259 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SLC25A45Q8N413 288 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NPWQ8N729 165 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 LRIG1Q96JA1 1093 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 BMFQ96LC9 184 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 GDAP1L1Q96MZ0 367 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NAP1L5Q96NT1 182 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SNRNP25Q9BV90 132 aaKnown RBP11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 OSBPL1AQ9BXW6 950 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SLC17A9Q9BYT1 436 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HAUS4Q9H6D7 363 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KLHL11Q9NVR0 708 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 AIPL1Q9NZN9 384 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HPCAL4Q9UM19 191 aa11.38□□□□□ -0.59
RAB11FIP3-210ENST00000487899 LY6G6EA0A0G2JKS1 128 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TSPAN11A1L157 253 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TMEM191CA6NGB0 347 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 INSIG1O15503 277 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 BUB1O43683 1085 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SIGLEC6O43699 453 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 LRCH4O75427 683 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PIAS2O75928 621 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 IGSF6O95976 241 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CCDC172P0C7W6 258 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PSMA2P25787 234 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HTR7P34969 479 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 IGFALSP35858 605 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PBX1P40424 430 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 YBEYP58557 167 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TPI1P60174 286 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SNRPD1P62314 119 aaKnown RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MAPK8IP2Q13387 824 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 COL9A2Q14055 689 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FZD2Q14332 565 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MYLK3Q32MK0 819 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 INO80DQ53TQ3 878 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HES3Q5TGS1 186 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 AFMIDQ63HM1 303 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PPP1R2P3Q6NXS1 205 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 Q6ZSR6 202 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZSCAN30Q86W11 494 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ARHGAP12Q8IWW6 846 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RYBPQ8N488 228 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DENND6BQ8NEG7 585 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZNF548Q8NEK5 533 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 OR4C6Q8NH72 309 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FNIP1Q8TF40 1166 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RAB7BQ96AH8 199 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KLHL32Q96NJ5 620 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KCTD15Q96SI1 283 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 C1QTNF2Q9BXJ5 285 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CCDC86Q9H6F5 360 aaKnown RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CATSPERBQ9H7T0 1116 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PARVAQ9NVD7 372 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PNMA8BQ9ULN7 279 aaPredicted RBP11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MFHAS1Q9Y4C4 1052 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 GPSM3Q9Y4H4 160 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 U3KQA8 63 aa11.37□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SPTY2D1-AS1A0A0U1RR47 76 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 IGLON5A6NGN9 336 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SMTNL1A8MU46 457 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 J3KR12 359 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FFAR2O15552 330 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TSPAN6O43657 245 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PIGNO95427 931 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PAK4O96013 591 aaPredicted RBP11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 GZMAP12544 262 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NME1P15531 152 aaKnown RBP11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TCF4P15884 667 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CKMT2P17540 419 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ITIH2P19823 946 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TNFAIP3P21580 790 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ACP1P24666 158 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RGRP47804 291 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PFN3P60673 137 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RHOAP61586 193 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DPYSQ14117 519 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms