RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 HNRNPA2B1P22626 353 aaKnown RBP17.9■□□□□ 0.46
COL6A1-204ENST00000486023 XPAP23025 273 aaPredicted RBP17.9■□□□□ 0.46
COL6A1-204ENST00000486023 AMPD1P23109 780 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 ARL4AP40617 200 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 ABL2P42684 1182 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 RPS21P63220 83 aaKnown RBP17.9■□□□□ 0.46
COL6A1-204ENST00000486023 SHC2P98077 582 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 BOLA3Q53S33 107 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 TXNRD3NBQ6F5E7 133 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 DBX2Q6ZNG2 339 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 ARHGAP36Q6ZRI8 547 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 CYP4V2Q6ZWL3 525 aaPredicted RBP17.9■□□□□ 0.46
COL6A1-204ENST00000486023 TP53INP2Q8IXH6 220 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 EID2Q8N6I1 236 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 OR8K1Q8NGG5 319 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 CASKIN2Q8WXE0 1202 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 LRIG1Q96JA1 1093 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 CDC6Q99741 560 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 OSBPL1AQ9BXW6 950 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
COL6A1-204ENST00000486023 CTTNBP2NLQ9P2B4 639 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 APOBEC2Q9Y235 224 aaKnown RBP17.9■□□□□ 0.46
COL6A1-204ENST00000486023 MFHAS1Q9Y4C4 1052 aa17.9■□□□□ 0.46
COL6A1-204ENST00000486023 PLXNA2O75051 1894 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 CXorf51AA0A1B0GTR3 108 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 C1QTNF9BB2RNN3 333 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 EIF3CLB5ME19 914 aaKnown RBP17.89■□□□□ 0.45
COL6A1-204ENST00000486023 MYO1FO00160 1098 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 PCDHGA12O60330 932 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 PRAMEF11O60813 436 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 TRIM16O95361 564 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 CYP1A2P05177 515 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 C1QTNF9P0C862 333 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 RARAP10276 462 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 PCK1P35558 622 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 KRT81Q14533 505 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 ACAP1Q15027 740 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 SHBQ15464 509 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 INAVAQ3KP66 663 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 CFAP58Q5T655 872 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 KIAA1161Q6NSJ0 714 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 NPWQ8N729 165 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 OR13H1Q8NG92 308 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 EIF3CQ99613 913 aaKnown RBP17.89■□□□□ 0.45
COL6A1-204ENST00000486023 LHX3Q9UBR4 397 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 FTSJ1Q9UET6 329 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 TPRP12270 2363 aaKnown RBP17.89■□□□□ 0.45
COL6A1-204ENST00000486023 ACACBO00763 2458 aa17.89■□□□□ 0.45
COL6A1-204ENST00000486023 TMEM110-MUSTN1A8MSY1 372 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 AKR1B10O60218 316 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 ADKP55263 362 aaKnown RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 SEMG2Q02383 582 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 FGL2Q14314 439 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 ZNF542PQ5EBM4 170 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 ZFYVE27Q5T4F4 411 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 Q6ZSR6 202 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 PTAR1Q7Z6K3 402 aaPredicted RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 IQCHQ86VS3 1027 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 PSTKQ8IV42 348 aaKnown RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 ARHGAP12Q8IWW6 846 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 ZNF564Q8TBZ8 553 aaPredicted RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 SAP25Q8TEE9 199 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 WRAP53Q9BUR4 548 aaKnown RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 PACSIN1Q9BY11 444 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 CAAP1Q9H8G2 361 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 ETNK2Q9NVF9 386 aa17.88■□□□□ 0.45
COL6A1-204ENST00000486023 IPO11Q9UI26 975 aaKnown RBP17.88■□□□□ 0.45
COL6A1-204ENST00000486023 NYNRINQ9P2P1 1898 aaKnown RBP17.87■□□□□ 0.45
COL6A1-204ENST00000486023 RAD51BO15315 384 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 TSPAN6O43657 245 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 MMP20O60882 483 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 LDOC1O95751 146 aaPredicted RBP17.87■□□□□ 0.45
COL6A1-204ENST00000486023 TIMP2P16035 220 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 EPHA8P29322 1005 aaPredicted RBP17.87■□□□□ 0.45
COL6A1-204ENST00000486023 OVGP1Q12889 678 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 DPYSQ14117 519 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 ST3GAL2Q16842 350 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 TMEM259Q4ZIN3 620 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 CPNE8Q86YQ8 564 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 VSTM4Q8IW00 320 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 OXR1Q8N573 874 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 TMEM145Q8NBT3 493 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 TSEN2Q8NCE0 465 aaKnown RBP17.87■□□□□ 0.45
COL6A1-204ENST00000486023 CXorf40AQ8TE69 158 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 CTNNBL1Q8WYA6 563 aaPredicted RBP17.87■□□□□ 0.45
COL6A1-204ENST00000486023 RAB7BQ96AH8 199 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 SUV39H2Q9H5I1 410 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 PDFQ9HBH1 243 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 WASF3Q9UPY6 502 aa17.87■□□□□ 0.45
COL6A1-204ENST00000486023 PCNX2A6NKB5 2137 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 TTC24A2A3L6 582 aaPredicted RBP17.86■□□□□ 0.45
COL6A1-204ENST00000486023 POM121BA6NF01 834 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 FPGTO14772 594 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 TNFSF14O43557 240 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 AP1G1O43747 822 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 PRKCGP05129 697 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 RGRP47804 291 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 HCAR3P49019 387 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 CDH6P55285 790 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms