RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 H3BM21 787 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 BUB1O43683 1085 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 KDELR3O43731 214 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 POP4O95707 220 aaKnown RBP19.52■□□□□ 0.72
COL27A1-205ENST00000485397 PRB1P04280 392 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 MPOP05164 745 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 GP1BAP07359 652 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 JUNDP17535 347 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 ITIH2P19823 946 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 STAT1P42224 750 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 GEMIN4P57678 1058 aaKnown RBP19.52■□□□□ 0.72
COL27A1-205ENST00000485397 PFN3P60673 137 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 WDR59Q6PJI9 974 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 TRIM72Q6ZMU5 477 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 ZSCAN30Q86W11 494 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 PYROXD2Q8N2H3 581 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 MAPK15Q8TD08 544 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 LMX1AQ8TE12 382 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 ASB12Q8WXK4 309 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 NTAN1Q96AB6 310 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 FCRL3Q96P31 734 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-205ENST00000485397 DEPDC7Q96QD5 511 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 KLC2Q9H0B6 622 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 ABCG4Q9H172 646 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 TCEAL2Q9H3H9 227 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-205ENST00000485397 NOL6Q9H6R4 1146 aaKnown RBP19.52■□□□□ 0.72
COL27A1-205ENST00000485397 USP29Q9HBJ7 922 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 SIK3Q9Y2K2 1263 aa19.52■□□□□ 0.72
COL27A1-205ENST00000485397 PTPRQQ9UMZ3 2332 aa19.52■□□□□ 0.71
COL27A1-205ENST00000485397 CHD5Q8TDI0 1954 aa19.52■□□□□ 0.71
COL27A1-205ENST00000485397 LOC400499M0QZD8 3231 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 AREL1O15033 823 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 AQP9O43315 295 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 MMP20O60882 483 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 USP12O75317 370 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 CSO75390 466 aaKnown RBP19.51■□□□□ 0.71
COL27A1-205ENST00000485397 TMCC1O94876 653 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 GPD1P21695 349 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 NSFP46459 744 aaKnown RBP19.51■□□□□ 0.71
COL27A1-205ENST00000485397 CDKN3Q16667 212 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 DEFB133Q30KQ1 61 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 FKBP15Q5T1M5 1219 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 ZCCHC8Q6NZY4 707 aaKnown RBP19.51■□□□□ 0.71
COL27A1-205ENST00000485397 GDPD4Q6W3E5 623 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 TTC7BQ86TV6 843 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 ZNF354CQ86Y25 554 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 SPACA3Q8IXA5 215 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 RBFAQ8N0V3 343 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 DENND6BQ8NEG7 585 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 CENPTQ96BT3 561 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 NAF1Q96HR8 494 aaKnown RBP19.51■□□□□ 0.71
COL27A1-205ENST00000485397 SELENOOQ9BVL4 669 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 OSBPL1AQ9BXW6 950 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 CSNK1G3Q9Y6M4 447 aa19.51■□□□□ 0.71
COL27A1-205ENST00000485397 SMG1Q96Q15 3661 aaKnown RBP19.5■□□□□ 0.71
COL27A1-205ENST00000485397 SHROOM3Q8TF72 1996 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 CPED1A4D0V7 1026 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 TGM2P21980 687 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 IGFALSP35858 605 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 GSCP56915 257 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-205ENST00000485397 GABREP78334 506 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 TLE3Q04726 772 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 CLEC16AQ2KHT3 1053 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 GUSBP11Q6P575 273 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 EFL1Q7Z2Z2 1120 aaKnown RBP19.5■□□□□ 0.71
COL27A1-205ENST00000485397 SLFN11Q7Z7L1 901 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 VPS36Q86VN1 386 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 GDAP1L1Q96MZ0 367 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 EVA1BQ9NVM1 165 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 FANCLQ9NW38 375 aa19.5■□□□□ 0.71
COL27A1-205ENST00000485397 PNMA8BQ9ULN7 279 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-205ENST00000485397 ZSCAN5CA6NGD5 496 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 CCP110O43303 1012 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 TPM2P07951 284 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 TIMP2P16035 220 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 EPHB2P29323 1055 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 COPB1P53618 953 aaKnown RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 C1orf61Q13536 156 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 SYCP1Q15431 976 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 SCYL2Q6P3W7 929 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 CRTC1Q6UUV9 634 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 PHF13Q86YI8 300 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 RTL3Q8N8U3 475 aaKnown RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 SLC39A7Q92504 469 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 ARHGEF26Q96DR7 871 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 HMCESQ96FZ2 354 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 PCMTD1Q96MG8 357 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 ZNF578Q96N58 590 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 LGMNQ99538 433 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 TTYH3Q9C0H2 523 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 MBNL1Q9NR56 388 aaKnown RBP19.49■□□□□ 0.71
COL27A1-205ENST00000485397 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 SALL4Q9UJQ4 1053 aa19.49■□□□□ 0.71
COL27A1-205ENST00000485397 SIGLEC16A6NMB1 481 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 ATXN7O15265 892 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-205ENST00000485397 INSIG1O15503 277 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 GCATO75600 419 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 TM7SF2O76062 418 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 CALB1P05937 261 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 LSSP48449 732 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms