RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SH3BP5O60239 455 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 CH25HO95992 272 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 F7P08709 466 aaPredicted RBP4.34□□□□□ -1.71
SMC4-215ENST00000484799 ARSAP15289 507 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 MYF6P23409 242 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 PAX3P23760 479 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 HALP42357 657 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 PPM1FP49593 454 aaPredicted RBP4.34□□□□□ -1.71
SMC4-215ENST00000484799 MXI1P50539 228 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 DDR1Q08345 913 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 ST3GAL1Q11201 340 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 MYBPHQ13203 477 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 THOC5Q13769 683 aaKnown RBP4.34□□□□□ -1.71
SMC4-215ENST00000484799 CAPSQ13938 189 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 RALBP1Q15311 655 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 FAM76BQ5HYJ3 339 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 ANKRD45Q5TZF3 282 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMC4-215ENST00000484799 RASGRP2Q7LDG7 609 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 ZNF354CQ86Y25 554 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 NEK9Q8TD19 979 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 CSGALNACT1Q8TDX6 532 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 POF1BQ8WVV4 589 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 RNF183Q96D59 192 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 SCLT1Q96NL6 688 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 PPP1R10Q96QC0 940 aaKnown RBP4.34□□□□□ -1.71
SMC4-215ENST00000484799 ENTPD7Q9NQZ7 604 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 IFT80Q9P2H3 777 aaPredicted RBP4.34□□□□□ -1.71
SMC4-215ENST00000484799 A0A0B4J293 547 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 MAGEA13PA6NCF6 341 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 CCT5P48643 541 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 MVDP53602 400 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 GRSF1Q12849 480 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMC4-215ENST00000484799 TRAF3Q13114 568 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 SNTA1Q13424 505 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 PKP1Q13835 747 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 TRIM14Q14142 442 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 CTTNQ14247 550 aaKnown RBP4.33□□□□□ -1.72
SMC4-215ENST00000484799 CALCRLQ16602 461 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 TRIM74Q86UV6 250 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 TRIM73Q86UV7 250 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 SPATA5Q8NB90 893 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 TRIB2Q92519 343 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 RAI2Q9Y5P3 530 aa4.33□□□□□ -1.72
SMC4-215ENST00000484799 A0A0U1RQJ8 604 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 DYTNA2CJ06 578 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 EIF5BO60841 1220 aaKnown RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 DDNO94850 711 aaPredicted RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 VNN2O95498 520 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 GJC1P36383 396 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 LIFRP42702 1097 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 PNLIPRP1P54315 467 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 GALNT1Q10472 559 aaPredicted RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 LPIN1Q14693 890 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 SMAD1Q15797 465 aaKnown RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 CES5AQ6NT32 575 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 RHBDF2Q6PJF5 856 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 LURAP1LQ8IV03 231 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 MB21D2Q8IYB1 491 aaPredicted RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 NKAPQ8N5F7 415 aaKnown RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 MAB21L3Q8N8X9 362 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 LMNTD1Q8N9Z9 388 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 ZMIZ2Q8NF64 920 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 HSPH1Q92598 858 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 CD101Q93033 1021 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 TRIM63Q969Q1 353 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 FAM167BQ9BTA0 163 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 MAF1Q9H063 256 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 CXorf56Q9H5V9 222 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 MVB12BQ9H7P6 319 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 WDR6Q9NNW5 1121 aaKnown RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 ATP8A2Q9NTI2 1148 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 LUZP4Q9P127 313 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 NLKQ9UBE8 527 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 SNX9Q9Y5X1 595 aa4.32□□□□□ -1.72
SMC4-215ENST00000484799 MORC2Q9Y6X9 1032 aaPredicted RBP4.32□□□□□ -1.72
SMC4-215ENST00000484799 NOTCH4Q99466 2003 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 TCF20Q9UGU0 1960 aaKnown RBP4.31□□□□□ -1.72
SMC4-215ENST00000484799 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 SERPINC1P01008 464 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 CYP21A2P08686 494 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 AMD1P17707 334 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 CST5P28325 142 aaPredicted RBP4.31□□□□□ -1.72
SMC4-215ENST00000484799 GRK6P43250 576 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 ADORA2A-AS1P86434 159 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 RUNX2Q13950 521 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 EDRF1Q3B7T1 1238 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 CCDC174Q6PII3 467 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 UNQ6126/PRO20091Q6UXV3 157 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 TMEM57Q8N5G2 664 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 RFLNBQ8N5W9 214 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 NOC3LQ8WTT2 800 aaKnown RBP4.31□□□□□ -1.72
SMC4-215ENST00000484799 AFG1LQ8WV93 481 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 CCT6BQ92526 530 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 SH3KBP1Q96B97 665 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 EVI5LQ96CN4 794 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 KTI12Q96EK9 354 aaPredicted RBP4.31□□□□□ -1.72
SMC4-215ENST00000484799 BICD1Q96G01 975 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms