RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 DPYSQ14117 519 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 CYTH1Q15438 398 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 HADHQ16836 314 aaKnown RBP14.08□□□□□ -0.16
VARS-225ENST00000482996 DBX2Q6ZNG2 339 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 H2AFVQ71UI9 128 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 KLK6Q92876 244 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 BTBD6Q96KE9 485 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 ERVMER34-1Q9H9K5 563 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 SP110Q9HB58 689 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 LCMT1Q9UIC8 334 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 PCOLCE2Q9UKZ9 415 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 NENFQ9UMX5 172 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 MFHAS1Q9Y4C4 1052 aa14.08□□□□□ -0.16
VARS-225ENST00000482996 EPG5Q9HCE0 2579 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 J3KR12 359 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 TSPAN6O43657 245 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 CBFA2T3O75081 653 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 MFAP3LO75121 409 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 RARAP10276 462 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 TCF4P15884 667 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 HNRNPA2B1P22626 353 aaKnown RBP14.07□□□□□ -0.16
VARS-225ENST00000482996 FAM193AP78312 1265 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 IL9RQ01113 521 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 KRT81Q14533 505 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 GRM3Q14832 879 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 TMEM259Q4ZIN3 620 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 PRAMEF14Q5SWL7 426 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 AFMIDQ63HM1 303 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 SEL1L3Q68CR1 1132 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 TMCO3Q6UWJ1 677 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 POLNQ7Z5Q5 900 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 CNGA4Q8IV77 575 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 ARHGAP12Q8IWW6 846 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 TMEM145Q8NBT3 493 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 NETO2Q8NC67 525 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 KLHDC7BQ96G42 594 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 MYOCQ99972 504 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 SLC17A9Q9BYT1 436 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 CPEB1Q9BZB8 566 aaKnown RBP14.07□□□□□ -0.16
VARS-225ENST00000482996 PDFQ9HBH1 243 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 ABHD10Q9NUJ1 306 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 LHX3Q9UBR4 397 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 ZFR2Q9UPR6 939 aaKnown RBP14.07□□□□□ -0.16
VARS-225ENST00000482996 APOBEC2Q9Y235 224 aaKnown RBP14.07□□□□□ -0.16
VARS-225ENST00000482996 TRPM6Q9BX84 2022 aa14.07□□□□□ -0.16
VARS-225ENST00000482996 PALMO75781 387 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 ITGAVP06756 1048 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 XPAP23025 273 aaPredicted RBP14.06□□□□□ -0.16
VARS-225ENST00000482996 SERPINB6P35237 376 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 ABL2P42684 1182 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
VARS-225ENST00000482996 IL10RBQ08334 325 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 SGCGQ13326 291 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 RFTN1Q14699 578 aaPredicted RBP14.06□□□□□ -0.16
VARS-225ENST00000482996 ASTE1Q2TB18 679 aaPredicted RBP14.06□□□□□ -0.16
VARS-225ENST00000482996 CFAP58Q5T655 872 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 GLRX5Q86SX6 157 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 TTC7BQ86TV6 843 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 NPWQ8N729 165 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 FAM174AQ8TBP5 190 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 EXOC2Q96KP1 924 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 CCDC42Q96M95 316 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 CSPG4P5Q96PW8 444 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 CINPQ9BW66 212 aaPredicted RBP14.06□□□□□ -0.16
VARS-225ENST00000482996 TRIM5Q9C035 493 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 PCDH18Q9HCL0 1135 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 FZD3Q9NPG1 666 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 DKK3Q9UBP4 350 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 IPO11Q9UI26 975 aaKnown RBP14.06□□□□□ -0.16
VARS-225ENST00000482996 CA5BQ9Y2D0 317 aa14.06□□□□□ -0.16
VARS-225ENST00000482996 AKR1B15C9JRZ8 316 aaPredicted RBP14.05□□□□□ -0.16
VARS-225ENST00000482996 INSIG1O15503 277 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 PROSCO94903 275 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 TMEM253P0C7T8 217 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 FTH1P19P0C7X4 201 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 THEGLP0DJG4 465 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 AMPD1P23109 780 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 RXRGP48443 463 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 CSNK1DP48730 415 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 SUOXP51687 545 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 ADKP55263 362 aaKnown RBP14.05□□□□□ -0.16
VARS-225ENST00000482996 CDH6P55285 790 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 TXNRD3NBQ6F5E7 133 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 SARM1Q6SZW1 724 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
VARS-225ENST00000482996 BAHD1Q8TBE0 780 aaPredicted RBP14.05□□□□□ -0.16
VARS-225ENST00000482996 HCAR2Q8TDS4 363 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 ZNF599Q96NL3 588 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 CNTNAP3BQ96NU0 1288 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 PACSIN1Q9BY11 444 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 CNTNAP3Q9BZ76 1288 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 SUV39H2Q9H5I1 410 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 NHEJ1Q9H9Q4 299 aaPredicted RBP14.05□□□□□ -0.16
VARS-225ENST00000482996 RCOR3Q9P2K3 495 aaPredicted RBP14.05□□□□□ -0.16
VARS-225ENST00000482996 SEPT3Q9UH03 358 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 BTBD3Q9Y2F9 522 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 HS3ST3A1Q9Y663 406 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 TMEM131Q92545 1883 aa14.05□□□□□ -0.16
VARS-225ENST00000482996 DOCK9Q9BZ29 2069 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms