RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GNSP15586 552 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 HSPA9P38646 679 aaKnown RBP21.19■□□□□ 0.98
SEC13-217ENST00000482647 RWDD2BP57060 319 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 SLC10A2Q12908 348 aaPredicted RBP21.19■□□□□ 0.98
SEC13-217ENST00000482647 PIP5KL1Q5T9C9 394 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 PEAR1Q5VY43 1037 aaPredicted RBP21.19■□□□□ 0.98
SEC13-217ENST00000482647 BZW1Q7L1Q6 419 aaKnown RBP21.19■□□□□ 0.98
SEC13-217ENST00000482647 SRLQ86TD4 932 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 NT5DC3Q86UY8 548 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 FATE1Q969F0 183 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 BIRC7Q96CA5 298 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 PARD6AQ9NPB6 346 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 SUSD2Q9UGT4 822 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 GUCA1BQ9UMX6 200 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 KHNYNO15037 678 aaKnown RBP21.18■□□□□ 0.98
SEC13-217ENST00000482647 MATN3O15232 486 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 INSIG1O15503 277 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 CST8O60676 142 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 KRT10P13645 584 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 MAOBP27338 520 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 MMP13P45452 471 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 MAPK8P45983 427 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 NR2C2P49116 596 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 NEK3P51956 506 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 COPS2P61201 443 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 DYNLT1P63172 113 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 HNRNPDQ14103 355 aaKnown RBP21.18■□□□□ 0.98
SEC13-217ENST00000482647 PDK1Q15118 436 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 ZNF662Q6ZS27 426 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 KIAA2013Q8IYS2 634 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 UBL4BQ8N7F7 174 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 CCNYQ8ND76 341 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 SNX19Q92543 992 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 VOPP1Q96AW1 172 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 ZNF641Q96N77 438 aaPredicted RBP21.18■□□□□ 0.98
SEC13-217ENST00000482647 KLHL32Q96NJ5 620 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 TUBGCP5Q96RT8 1024 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 MIR1-1HGQ9H1L0 117 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 PREBQ9HCU5 417 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 HAUS2Q9NVX0 235 aa21.18■□□□□ 0.98
SEC13-217ENST00000482647 C16orf96A6NNT2 1141 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 MIF4GDA9UHW6 222 aaKnown RBP21.17■□□□□ 0.98
SEC13-217ENST00000482647 IGHV4-34P06331 123 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 PTMAP06454 111 aaKnown RBP21.17■□□□□ 0.98
SEC13-217ENST00000482647 ADRB3P13945 408 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 CETN2P41208 172 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 RGRP47804 291 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 PEX5P50542 639 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 SCNN1BP51168 640 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 CCR5P51681 352 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 TAS2R38P59533 333 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 GSE1Q14687 1217 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 PPP2R5EQ16537 467 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 DUOXA1Q1HG43 343 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 KAZNQ674X7 775 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 NEK5Q6P3R8 708 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 TEX26Q8N6G2 289 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 C12orf50Q8NA57 414 aaPredicted RBP21.17■□□□□ 0.98
SEC13-217ENST00000482647 HCAR2Q8TDS4 363 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 UBE2Q2Q8WVN8 375 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 RAB7BQ96AH8 199 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 HDAC11Q96DB2 347 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 SMOC1Q9H4F8 434 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 ATP13A3Q9H7F0 1226 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 DKK3Q9UBP4 350 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 EIF2B4Q9UI10 523 aaKnown RBP21.17■□□□□ 0.98
SEC13-217ENST00000482647 ATXN2Q99700 1313 aaKnown RBP21.17■□□□□ 0.98
SEC13-217ENST00000482647 THADAQ6YHU6 1953 aa21.17■□□□□ 0.98
SEC13-217ENST00000482647 CFAP54Q96N23 3096 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 hCG_1818297A0A087WSY0 165 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 PPP1R12AO14974 1030 aaPredicted RBP21.16■□□□□ 0.98
SEC13-217ENST00000482647 MUSKO15146 869 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 CD27P26842 260 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 AP1S1P61966 158 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 LLGL1Q15334 1064 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 PRR23CQ6ZRP0 262 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 PARS2Q7L3T8 475 aaKnown RBP21.16■□□□□ 0.98
SEC13-217ENST00000482647 TTC7BQ86TV6 843 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 CCDC13Q8IYE1 715 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 MAML1Q92585 1016 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 LGMNQ99538 433 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 BRD8Q9H0E9 1235 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 SUV39H2Q9H5I1 410 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 LZTFL1Q9NQ48 299 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 CAPN6Q9Y6Q1 641 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 GON4LQ3T8J9 2241 aa21.16■□□□□ 0.98
SEC13-217ENST00000482647 PRR5-ARHGAP8B1AHC4 643 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 C10orf142B7Z368 130 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 BCAT2O15382 392 aaPredicted RBP21.15■□□□□ 0.98
SEC13-217ENST00000482647 NEBLO76041 1014 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 PIGNO95427 931 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 FTCDO95954 541 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 CFIP05156 583 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 CCNB1P14635 433 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 TGM2P21980 687 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 SERPINA4P29622 427 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 LMNB2Q03252 620 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 BCL2L1Q07817 233 aa21.15■□□□□ 0.98
SEC13-217ENST00000482647 PPIDQ08752 370 aaKnown RBP21.15■□□□□ 0.98
SEC13-217ENST00000482647 SF3A2Q15428 464 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms