RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PRICKLE4Q2TBC4 344 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 FAM180BQ6P0A1 224 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 TRIM74Q86UV6 250 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 TRIM73Q86UV7 250 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 ZMIZ2Q8NF64 920 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 TMEM170AQ8WVE7 144 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 LPAR1Q92633 364 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 KLHL15Q96M94 604 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 NLRP4Q96MN2 994 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 ZNF48Q96MX3 618 aaPredicted RBP4.04□□□□□ -1.76
CBX3-207ENST00000481300 KIAA1456Q9P272 454 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 AASSQ9UDR5 926 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 NAALADL1Q9UQQ1 740 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 PRXQ9BXM0 1461 aa4.04□□□□□ -1.76
CBX3-207ENST00000481300 TMEM272A0A1B0GTI8 110 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 STMND1H3BQB6 276 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 HSPB6O14558 160 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 PPEF2O14830 753 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 MDM4O15151 490 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 TACC1O75410 805 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 TMEM63AO94886 807 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 KLKB1P03952 638 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 TMEM191BP0C7N4 346 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 HSPA1AP0DMV8 641 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 HSPA1BP0DMV9 641 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 IRF1P10914 325 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 UBL4AP11441 157 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 PCNAP12004 261 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 ENO3P13929 434 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 ZNF8P17098 575 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 EPHA8P29322 1005 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 PTGER1P34995 402 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 EIF3BP55884 814 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 SLC18A2Q05940 514 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 LMOD3Q0VAK6 560 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 MAPRE1Q15691 268 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 SLC9B1Q4ZJI4 515 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 HEPHL1Q6MZM0 1159 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 INO80CQ6PI98 192 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 CPLX4Q7Z7G2 160 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 GPAT4Q86UL3 456 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 GPSM1Q86YR5 675 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 LURAP1LQ8IV03 231 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 DIS3L2Q8IYB7 885 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 MMP21Q8N119 569 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 TMEM199Q8N511 208 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 OR4N2Q8NGD1 307 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 TDRD7Q8NHU6 1098 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 CEP76Q8TAP6 659 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 ZBTB9Q96C00 473 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 RNF183Q96D59 192 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 MSI2Q96DH6 328 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 LHPPQ9H008 270 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 SPRTNQ9H040 489 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 FOXP1Q9H334 677 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 MAP6D1Q9H9H5 199 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 WDR6Q9NNW5 1121 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 SPATS2LQ9NUQ6 558 aaKnown RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 POT1Q9NUX5 634 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 ORC3Q9UBD5 711 aaPredicted RBP4.03□□□□□ -1.76
CBX3-207ENST00000481300 WDR62O43379 1518 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 GOLGA3Q08378 1498 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 GAPVD1Q14C86 1478 aa4.03□□□□□ -1.76
CBX3-207ENST00000481300 BIVM-ERCC5R4GMW8 1640 aa4.03□□□□□ -1.77
CBX3-207ENST00000481300 ITIH6Q6UXX5 1313 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 ZNF608Q9ULD9 1512 aaPredicted RBP4.02□□□□□ -1.77
CBX3-207ENST00000481300 IGLV5-39A0A0G2JS06 123 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 SOCS2O14508 198 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 TNFSF14O43557 240 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 ATG13O75143 517 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 BAIAP3O94812 1187 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 IFNA2P01563 188 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 PTPN2P17706 415 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 CTPS1P17812 591 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 CHMP24386 653 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 AVPR1AP37288 418 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 CENPAP49450 140 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 CDH12P55289 794 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 SRSF1Q07955 248 aaKnown RBP eCLIP4.02□□□□□ -1.77
CBX3-207ENST00000481300 PKP1Q13835 747 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 PPP2R5BQ15173 497 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 ATG9BQ674R7 924 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 CES5AQ6NT32 575 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 PARM1Q6UWI2 310 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 FAM83HQ6ZRV2 1179 aaPredicted RBP4.02□□□□□ -1.77
CBX3-207ENST00000481300 TBC1D26Q86UD7 250 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 PIM3Q86V86 326 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 PALB2Q86YC2 1186 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 KDM1BQ8NB78 822 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 ZNF548Q8NEK5 533 aaPredicted RBP4.02□□□□□ -1.77
CBX3-207ENST00000481300 ETNPPLQ8TBG4 499 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 METTL6Q8TCB7 284 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 BICD2Q8TD16 824 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 SLC25A28Q96A46 364 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 OTULINQ96BN8 352 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 ZC3HAV1LQ96H79 300 aaKnown RBP4.02□□□□□ -1.77
CBX3-207ENST00000481300 FCRL4Q96PJ5 515 aa4.02□□□□□ -1.77
CBX3-207ENST00000481300 WDR77Q9BQA1 342 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms