RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PRLRP16471 622 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 HNRNPA2B1P22626 353 aaKnown RBP17.25■□□□□ 0.35
HSPG2-209ENST00000480900 AKT2P31751 481 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 ARL4AP40617 200 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 GRK6P43250 576 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 ARRB1P49407 418 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-209ENST00000480900 RPS21P63220 83 aaKnown RBP17.25■□□□□ 0.35
HSPG2-209ENST00000480900 SLC18A3Q16572 532 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 INAVAQ3KP66 663 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 ARHGAP12Q8IWW6 846 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 OXR1Q8N573 874 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 LZTR1Q8N653 840 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 ARHGEF26Q96DR7 871 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 FEM1CQ96JP0 617 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 CNTNAP3BQ96NU0 1288 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 CDC6Q99741 560 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 CNTNAP3Q9BZ76 1288 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 CPEB1Q9BZB8 566 aaKnown RBP17.25■□□□□ 0.35
HSPG2-209ENST00000480900 LHX3Q9UBR4 397 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 USP24Q9UPU5 2620 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 J3KR12 359 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 MYO1FO00160 1098 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 TSPAN6O43657 245 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 TRIM16O95361 564 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 RARAP10276 462 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 PAPOLAP51003 745 aaKnown RBP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 SLC25A11Q02978 314 aaKnown RBP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 CYTH1Q15438 398 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 SMTNL2Q2TAL5 461 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 SEL1L3Q68CR1 1132 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 GDPD4Q6W3E5 623 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 POLNQ7Z5Q5 900 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 NPWQ8N729 165 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 ZNF564Q8TBZ8 553 aaPredicted RBP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 RHBDD1Q8TEB9 315 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 HSPH1Q92598 858 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 KLK6Q92876 244 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 BTBD6Q96KE9 485 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 KLHL32Q96NJ5 620 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 ZNHIT6Q9NWK9 470 aaKnown RBP17.24■□□□□ 0.35
HSPG2-209ENST00000480900 UVRAGQ9P2Y5 699 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 DKK3Q9UBP4 350 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 BTBD3Q9Y2F9 522 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 AKAP13Q12802 2813 aa17.24■□□□□ 0.35
HSPG2-209ENST00000480900 FRYQ5TBA9 3013 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 AREL1O15033 823 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 MFAP3LO75121 409 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 ABL2P42684 1182 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 RXRGP48443 463 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 IL9RQ01113 521 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 GRM3Q14832 879 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 SHBQ15464 509 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
HSPG2-209ENST00000480900 ASTE1Q2TB18 679 aaPredicted RBP17.23■□□□□ 0.35
HSPG2-209ENST00000480900 PRAMEF14Q5SWL7 426 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 NETO2Q8NC67 525 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 FAM174AQ8TBP5 190 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 KLHDC7BQ96G42 594 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 SLC17A9Q9BYT1 436 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 SP110Q9HB58 689 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 CA5BQ9Y2D0 317 aa17.23■□□□□ 0.35
HSPG2-209ENST00000480900 DFFAO00273 331 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 NEMP1O14524 444 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 H2AFZP0C0S5 128 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 FTH1P19P0C7X4 201 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 EPHA8P29322 1005 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-209ENST00000480900 IL10RBQ08334 325 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 FGL2Q14314 439 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 RFTN1Q14699 578 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-209ENST00000480900 TXNRD3NBQ6F5E7 133 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 H2AFVQ71UI9 128 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 ABI3BPQ7Z7G0 1075 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 HCAR2Q8TDS4 363 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 SAP25Q8TEE9 199 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 CTNNBL1Q8WYA6 563 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-209ENST00000480900 EXOC2Q96KP1 924 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 MYOCQ99972 504 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 SCNM1Q9BWG6 230 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 C1QTNF2Q9BXJ5 285 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 DEF6Q9H4E7 631 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 PCDH18Q9HCL0 1135 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 FZD3Q9NPG1 666 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 ABHD10Q9NUJ1 306 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 CTTNBP2NLQ9P2B4 639 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 RCOR3Q9P2K3 495 aaPredicted RBP17.22■□□□□ 0.35
HSPG2-209ENST00000480900 LCMT1Q9UIC8 334 aa17.22■□□□□ 0.35
HSPG2-209ENST00000480900 APOBEC2Q9Y235 224 aaKnown RBP17.22■□□□□ 0.35
HSPG2-209ENST00000480900 PLXNB3Q9ULL4 1909 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 TSPAN11A1L157 253 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 INSIG1O15503 277 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 SPINT1O43278 529 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 HYAL3O43820 417 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-209ENST00000480900 AKR1B10O60218 316 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 PALMO75781 387 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 TOP3BO95985 862 aaKnown RBP17.21■□□□□ 0.35
HSPG2-209ENST00000480900 THEGLP0DJG4 465 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms