RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GJB2P29033 226 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 PCSK1P29120 753 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 DNAJA1P31689 397 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ETFBP38117 255 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 EIF2DP41214 584 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 UBA7P41226 1012 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 PNPLA4P41247 253 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 GRIA2P42262 883 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 TNFRSF4P43489 277 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 LHX1P48742 406 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 NOP14P78316 857 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF33AQ06730 810 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 LMAN2Q12907 356 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 RESTQ13127 1097 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 DUOXA1Q1HG43 343 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 WDR72Q3MJ13 1102 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 MDH1BQ5I0G3 518 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SPDYCQ5MJ68 293 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 LYSMD4Q5XG99 296 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SLFN12LQ6IEE8 588 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 VSTM1Q6UX27 236 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CCNI2Q6ZMN8 369 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 TOGARAM2Q6ZUX3 1019 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CXXC5Q7LFL8 322 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 C11orf74Q86VG3 221 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 LDLRAD3Q86YD5 345 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CBWD2Q8IUF1 395 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SCUBE1Q8IWY4 988 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ZMIZ2Q8NF64 920 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 MYCBPAPQ8TBZ2 947 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 SPATA18Q8TC71 538 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ADAMTS14Q8WXS8 1223 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 VOPP1Q96AW1 172 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CALML4Q96GE6 196 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 HPDLQ96IR7 371 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 TMX3Q96JJ7 454 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 AK8Q96MA6 479 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 TACO1Q9BSH4 297 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 GTPBP2Q9BX10 602 aaKnown RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF518BQ9C0D4 1074 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CDIP1Q9H305 208 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 IL21RQ9HBE5 538 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 RBAKQ9NYW8 714 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 IL37Q9NZH6 218 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 TRPM5Q9NZQ8 1165 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 MAGEC2Q9UBF1 373 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CHORDC1Q9UHD1 332 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-207ENST00000477676 ITGA11Q9UKX5 1188 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CDH9Q9ULB4 789 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 RAD54BQ9Y620 910 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 CLIC4Q9Y696 253 aa4.84□□□□□ -1.63
CKS1B-207ENST00000477676 COL27A1Q8IZC6 1860 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 COL5A1P20908 1838 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 AHCTF1Q8WYP5 2266 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 DOPEY2Q9Y3R5 2298 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 E2F8A0AVK6 867 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 ESYT3A0FGR9 886 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 KCNJ18B7U540 433 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 AQP7O14520 342 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 HOXC11O43248 304 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 CDC14BO60729 498 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 OPHN1O60890 802 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 TBCAO75347 108 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 BEST1O76090 585 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 ALDH1A2O94788 518 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 STK10O94804 968 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 TBX18O95935 607 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 KRT18P05783 430 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 KRT19P08727 400 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 CISD3P0C7P0 127 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 MBL2P11226 248 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 HOXB2P14652 356 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 NTSR1P30989 418 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 HOXD12P35452 270 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 LONP1P36776 959 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 CDH8P55286 799 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 RBP5P82980 135 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 GRIK2Q13002 908 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 POSTNQ15063 836 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 TRIP6Q15654 476 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 EOGTQ5NDL2 527 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 SNX30Q5VWJ9 437 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 BTBD8Q5XKL5 378 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 MRM1Q6IN84 353 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 FAM173BQ6P4H8 233 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 C4orf50Q6ZRC1 276 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 TRAPPC11Q7Z392 1133 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 KIAA1958Q8N8K9 716 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 TRIML1Q8N9V2 468 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 FSIP1Q8NA03 581 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 TERB1Q8NA31 727 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 IPO4Q8TEX9 1081 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 HVCN1Q96D96 273 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 ZNF419Q96HQ0 510 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 C8orf48Q96LL4 319 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 ACCSQ96QU6 501 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 KCNK16Q96T55 309 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 SDCBP2Q9H190 292 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms