RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 F8W810 466 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 GAS2O43903 313 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 OR7A10O76100 309 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM253P0C7T8 217 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 CYP3A5P20815 502 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 IMPDH1P20839 514 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ADSSP30520 456 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 LEPRP48357 1165 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 COPAP53621 1224 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 VAC14Q08AM6 782 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TTLL4Q14679 1199 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 CELF3Q5SZQ8 465 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 MAP1SQ66K74 1059 aaPredicted RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ZC3H7AQ8IWR0 971 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 ABHD11Q8NFV4 315 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 RBM14Q96PK6 669 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TWNKQ96RR1 684 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TSEN34Q9BSV6 310 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 FNIP2Q9P278 1114 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 UGT2A1Q9Y4X1 527 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
RTFDC1-207ENST00000477573 TRAV6A0A075B6T7 132 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CCL15-CCL14A0A0B4J2E2 113 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 PDHXO00330 501 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ADAM11O75078 769 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 DHRS4L1P0CG22 281 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF26P17031 533 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CHRNB2P17787 502 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ARL2P36404 184 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 MAGEA11P43364 429 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 HARS2P49590 506 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 LIG4P49917 911 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 HK2P52789 917 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 HADHBP55084 474 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 SLC25A3Q00325 362 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 OTUD4Q01804 1114 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 PTK6Q13882 451 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 DRAP1Q14919 205 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CCL15Q16663 113 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM26Q6ZUK4 368 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 PLPPR4Q7Z2D5 763 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ANKS1BQ7Z6G8 1248 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 GPD1LQ8N335 351 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 C2orf69Q8N8R5 385 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 FANK1Q8TC84 345 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM143Q96AN5 459 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 SCYL1Q96KG9 808 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 MCMBPQ9BTE3 642 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CHID1Q9BWS9 393 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 FANCFQ9NPI8 374 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CHST12Q9NRB3 414 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 KIF17Q9P2E2 1029 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 PSMC3IPQ9P2W1 217 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF229Q9UJW7 825 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 PRR5-ARHGAP8B1AHC4 643 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 K7ERI5 159 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 SOCS7O14512 581 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 AURKAO14965 403 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CCNKO75909 580 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 SLITRK5O94991 958 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 IFNA16P05015 189 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CYP2C8P10632 490 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 EEF1DP29692 281 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 GCLMP48507 274 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ST13P50502 369 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 NAB1Q13506 487 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 TARBP2Q15633 366 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 SLFN12LQ6IEE8 588 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 APPL2Q8NEU8 664 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CDC26Q8NHZ8 85 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 ALG3Q92685 438 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 HEXIM2Q96MH2 286 aaKnown RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 PCYT2Q99447 389 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 GPR20Q99678 358 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 HEMGNQ9BXL5 484 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 DNMT3LQ9UJW3 386 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 TMEM5Q9Y2B1 443 aa12.8□□□□□ -0.36
RTFDC1-207ENST00000477573 CENPXA8MT69 81 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 C12orf71A8MTZ7 269 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 POC1B-GALNT4F8VUJ3 575 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TOR1AO14656 332 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 MUSKO15146 869 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 IFNA14P01570 189 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 GSNP06396 782 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 ATF7P17544 494 aaPredicted RBP12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 IVDP26440 423 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 PIK3R1P27986 724 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 ITGA8P53708 1063 aa12.79□□□□□ -0.36
RTFDC1-207ENST00000477573 TAP1Q03518 808 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms