RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 USP37Q86T82 979 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 RBM23Q86U06 439 aaKnown RBP5.54□□□□□ -1.52
VPS45-207ENST00000477558 TCEAL8Q8IYN2 117 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 TMEM86AQ8N2M4 240 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 ZNF461Q8TAF7 563 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 SLC35B2Q8TB61 432 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 TAF4BQ92750 862 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 HDAC10Q969S8 669 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 CCDC127Q96BQ5 260 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 EEF2KMTQ96G04 330 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 HPDLQ96IR7 371 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 FNBP1Q96RU3 617 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 ADOQ96SZ5 270 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 FUCA2Q9BTY2 467 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 ZCWPW1Q9H0M4 648 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 CDH19Q9H159 772 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 KCNH6Q9H252 994 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 FAM124BQ9H5Z6 455 aaPredicted RBP5.54□□□□□ -1.52
VPS45-207ENST00000477558 TMEM8AQ9HCN3 771 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 AFF4Q9UHB7 1163 aaKnown RBP5.54□□□□□ -1.52
VPS45-207ENST00000477558 CD207Q9UJ71 328 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 AJAP1Q9UKB5 411 aaPredicted RBP5.54□□□□□ -1.52
VPS45-207ENST00000477558 AGAP1Q9UPQ3 857 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 PCDHB1Q9Y5F3 818 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 CDY1Q9Y6F8 540 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 WDFY4Q6ZS81 3184 aa5.54□□□□□ -1.52
VPS45-207ENST00000477558 MTMR11A4FU01 709 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CAPN14A8MX76 684 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CYB561D2O14569 222 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 P4HA2O15460 535 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CSPG5O95196 566 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 SRGAP2BP0DMP2 458 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 EPB41P11171 864 aaKnown RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 IL9P15248 144 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 TNNI1P19237 187 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 PCSK1P29120 753 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 OR1D2P34982 312 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 MXI1P50539 228 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 MYL6P60660 151 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 SMARCB1Q12824 385 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CFAP221Q4G0U5 840 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CTXN3Q4LDR2 81 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 KRT39Q6A163 491 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 ISM2Q6H9L7 571 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 FAM171BQ6P995 826 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 ZNF572Q7Z3I7 529 aaPredicted RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 CEP57Q86XR8 500 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CSGALNACT2Q8N6G5 542 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 LMO3Q8TAP4 145 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 TAS1R2Q8TE23 839 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 C2orf15Q8WU43 125 aaKnown RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 SEMA4DQ92854 862 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 SYAP1Q96A49 352 aaPredicted RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 NECTIN4Q96NY8 510 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 TSG101Q99816 390 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 ACBD6Q9BR61 282 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 CPPED1Q9BRF8 314 aaPredicted RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 KLC2Q9H0B6 622 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 SDCBP2Q9H190 292 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 HSD3B7Q9H2F3 369 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 APOBEC3GQ9HC16 384 aaKnown RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 METTL14Q9HCE5 456 aaKnown RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 ARMCX3Q9UH62 379 aaPredicted RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 CNOT11Q9UKZ1 510 aaKnown RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 USP15Q9Y4E8 981 aaPredicted RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 INSL5Q9Y5Q6 135 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 ACTL7AQ9Y615 435 aa5.53□□□□□ -1.52
VPS45-207ENST00000477558 HELZP42694 1942 aaKnown RBP5.53□□□□□ -1.52
VPS45-207ENST00000477558 TECTAO75443 2155 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 E2F8A0AVK6 867 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 LOC730098B7Z3J9 87 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 STX10O60499 249 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 MFAP3LO75121 409 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 RFPL2O75678 378 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 SEC24AO95486 1093 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 GNA14O95837 355 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 HLA-DRAP01903 254 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 KRT13P13646 458 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 ALOX15P16050 662 aaPredicted RBP5.52□□□□□ -1.53
VPS45-207ENST00000477558 ZNF18P17022 549 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 ATF6P18850 670 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 KLRC2P26717 231 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 MAGEA11P43364 429 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 GCLMP48507 274 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 LHX1P48742 406 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 FMO5P49326 533 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 NOP14P78316 857 aaKnown RBP5.52□□□□□ -1.53
VPS45-207ENST00000477558 DSC2Q02487 901 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 EFEMP1Q12805 493 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 MYO1EQ12965 1108 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 TARDBPQ13148 414 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS45-207ENST00000477558 CCDC142Q17RM4 750 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 SGSM1Q2NKQ1 1148 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 ZNF699Q32M78 642 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 AFMIDQ63HM1 303 aa5.52□□□□□ -1.53
VPS45-207ENST00000477558 KLHL10Q6JEL2 608 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms