RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PACRGLQ8N7B6 248 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 C4orf32Q8N8J7 132 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PRELID2Q8N945 189 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SLC26A7Q8TE54 656 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 TOP1MTQ969P6 601 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PGBD4Q96DM1 585 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 CLIP3Q96DZ5 547 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DCUN1D1Q96GG9 259 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 TXNDC15Q96J42 360 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 UQCC2Q9BRT2 126 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 THTPAQ9BU02 230 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 TMEM120AQ9BXJ8 343 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GON7Q9BXV9 100 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 GCOM2Q9BZD3 368 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 SMARCAD1Q9H4L7 1026 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 MARCH7Q9H992 704 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DBNDD1Q9H9R9 158 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 KIAA1586Q9HCI6 787 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PARVAQ9NVD7 372 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 NINJ2Q9NZG7 142 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PPP4R1LQ9P1A2 415 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 LRP2BPQ9P2M1 347 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 PSMC3IPQ9P2W1 217 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 KCNN3Q9UGI6 736 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 XPO7Q9UIA9 1087 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ANAPC5Q9UJX4 755 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 NOSIPQ9Y314 301 aaKnown RBP4.8□□□□□ -1.64
PTCD3-212ENST00000477520 AP4B1Q9Y6B7 739 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 ZHX2Q9Y6X8 837 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 TIAM2Q8IVF5 1701 aa4.8□□□□□ -1.64
PTCD3-212ENST00000477520 DUOX1Q9NRD9 1551 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 MN1Q10571 1320 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 GSTTP1A0A1W2PQM5 241 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 TRIM64A6NGJ6 449 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 MROH6A6NGR9 719 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 SNTNA6NMZ2 147 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 MEIS3P2A8K0S8 358 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 B4E1Z4 1266 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CLDN25C9JDP6 229 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 FZD9O00144 591 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 EPHB6O15197 1021 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 SLC16A3O15427 465 aaKnown RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ASNA1O43681 348 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 RAD17O75943 681 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ACSL3O95573 720 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 GH1P01241 217 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 FYNP06241 537 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 LDHCP07864 332 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 DHRS4L1P0CG22 281 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ACRP10323 421 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 RBP3P10745 1247 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 UCHL3P15374 230 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 TGM1P22735 817 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 RPA1P27694 616 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 PCSK6P29122 969 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CASP1P29466 404 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 RRM2P31350 389 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 THBS2P35442 1172 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ECE1P42892 770 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 MCAMP43121 646 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 DNA2P51530 1060 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 COPAP53621 1224 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 AP3M2P53677 418 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 IST1P53990 364 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 GALCP54803 685 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 SRP54P61011 504 aaKnown RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 HAND2P61296 217 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 MYBPC1Q00872 1141 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CXCL9Q07325 125 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 COX10Q12887 443 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 PTP4A2Q12974 167 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 PPIL2Q13356 520 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 PRKD1Q15139 912 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CDONQ4KMG0 1287 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 SEZ6Q53EL9 994 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 FSCBQ5H9T9 825 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 RABGAP1LQ5R372 815 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 MFSD14BQ5SR56 506 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 TMTC4Q5T4D3 741 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 C6orf183Q5T699 404 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 TDRD10Q5VZ19 366 aaKnown RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 KRT39Q6A163 491 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 NANOGP8Q6NSW7 305 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 PPP1R2P3Q6NXS1 205 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 RAPH1Q70E73 1250 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ARCQ7LC44 396 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ERMP1Q7Z2K6 904 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF571Q7Z3V5 609 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CCDC25Q86WR0 208 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CCDC28AQ8IWP9 274 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CLYBLQ8N0X4 340 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 GPC2Q8N158 579 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 SIX6OS1Q8N1H7 587 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 FBXW8Q8N3Y1 598 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 CARNMT1Q8N4J0 409 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 TMCO5AQ8N6Q1 288 aa4.79□□□□□ -1.64
PTCD3-212ENST00000477520 ZNF713Q8N859 430 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-212ENST00000477520 SNX31Q8N9S9 440 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms