RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TPM1P09493 284 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TPBGLP0DKB5 382 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ARP10275 920 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PIM1P11309 404 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ETS1P14921 441 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ELNP15502 786 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CSF2RAP15509 400 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ZFXP17010 805 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 GABRB1P18505 474 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FUT4P22083 530 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SFPQP23246 707 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CORO1AP31146 461 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PTPN7P35236 360 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RFC4P35249 363 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MAP2K2P36507 400 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PBX3P40426 434 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MDH1P40925 334 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RABIFP47224 123 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ETV1P50549 477 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 HK2P52789 917 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 BEX3Q00994 111 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CYP4A11Q02928 519 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CSTF3Q12996 717 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TRA2AQ13595 282 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SSPNQ14714 243 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 KCNAB1Q14722 419 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 IQCB1Q15051 598 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 HFEQ30201 348 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SLC9B1Q4ZJI4 515 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SGO2Q562F6 1265 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF789Q5FWF6 425 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MDH1BQ5I0G3 518 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 UTP14CQ5TAP6 766 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CACHD1Q5VU97 1274 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FAM171A1Q5VUB5 890 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 KRT79Q5XKE5 535 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PM20D1Q6GTS8 502 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 JADE1Q6IE81 842 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 AFTPHQ6ULP2 937 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MOXD1Q6UVY6 613 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 DPP8Q6V1X1 898 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SYNE3Q6ZMZ3 975 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 C15orf39Q6ZRI6 1047 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SEM1Q6ZVN7 128 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FAM214BQ7L5A3 538 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CXXC5Q7LFL8 322 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TAS2R42Q7RTR8 314 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PTF1AQ7RTS3 328 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TRIM46Q7Z4K8 759 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 DSG4Q86SJ6 1040 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MFN1Q8IWA4 741 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TIGD4Q8IY51 512 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC13Q8IYE1 715 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 KDM8Q8N371 416 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM130Q8N3G9 435 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PI4KAP1Q8N8J0 262 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ANKS4BQ8N8V4 417 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NHLRC2Q8NBF2 726 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NETO2Q8NC67 525 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SHCBP1Q8NEM2 672 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 LPCAT1Q8NF37 534 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 DNERQ8NFT8 737 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 OR6C4Q8NGE1 309 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 OR5AN1Q8NGI8 311 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MBD3L2Q8NHZ7 208 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 IGDCC4Q8TDY8 1250 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NSMCE1Q8WV22 266 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SGCDQ92629 289 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SCAMP4Q969E2 229 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TEKT1Q969V4 418 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RAB7BQ96AH8 199 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PTERQ96BW5 349 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 C1orf74Q96LT6 269 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CEP295NLQ96MC4 621 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 WDR92Q96MX6 357 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 AGAP3Q96P47 875 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PKP2Q99959 881 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PAAF1Q9BRP4 392 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PIMREGQ9BSJ6 248 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SOX7Q9BT81 388 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 THUMPD2Q9BTF0 503 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 STRA6Q9BX79 667 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 AMNQ9BXJ7 453 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CEP41Q9BYV8 373 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 PCED1AQ9H1Q7 454 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NRDE2Q9H7Z3 1164 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM206Q9H813 350 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 LRRC40Q9H9A6 602 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FANCEQ9HB96 536 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MAGEE1Q9HCI5 957 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FSCN3Q9NQT6 498 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SEMA3GQ9NS98 782 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 IARS2Q9NSE4 1012 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ARL8BQ9NVJ2 186 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 GPRC5DQ9NZD1 345 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FBXL17Q9UF56 701 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 IL17BQ9UHF5 180 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 NUDT5Q9UKK9 219 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 STX8Q9UNK0 236 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 ADAMTS8Q9UP79 889 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms