RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 OR2T34Q8NGX1 318 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 ALG3Q92685 438 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 MYOCQ99972 504 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 IL21RQ9HBE5 538 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 SGK2Q9HBY8 427 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 TM9SF3Q9HD45 589 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 FZD3Q9NPG1 666 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 RCOR3Q9P2K3 495 aaPredicted RBP12.61□□□□□ -0.39
APTX-220ENST00000476858 NCKAP1Q9Y2A7 1128 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 ADGRG1Q9Y653 693 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 CAPN6Q9Y6Q1 641 aa12.61□□□□□ -0.39
APTX-220ENST00000476858 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3DA0A087WVF3 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3IA0A087WXS9 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3EA0A087X179 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3KA0A087X1G2 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 A0A0U1RQS6 177 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 A0A1B0GVT2 93 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3FA6NER0 549 aaPredicted RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 ZSCAN5CA6NGD5 496 aaPredicted RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3LB9A6J9 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 RNGTTO60942 597 aaKnown RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 LRP3O75074 770 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 PRNPP04156 253 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3HP0C7X1 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 ADRB3P13945 408 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TIMP2P16035 220 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 ENGP17813 658 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 ITGB7P26010 798 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 MAPK8P45983 427 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 RECQLP46063 649 aaPredicted RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 ZNF135P52742 658 aaPredicted RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 SNRPD1P62314 119 aaKnown RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 GALNT2Q10471 571 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 LBRQ14739 615 aaKnown RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 TAZQ16635 292 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 AASDHQ4L235 1098 aaPredicted RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 PRAMEF14Q5SWL7 426 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 LRRC38Q5VT99 294 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 SLC9A4Q6AI14 798 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3GQ6DHY5 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3CQ6IPX1 549 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 DSG4Q86SJ6 1040 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 DAAM2Q86T65 1068 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 KIAA1328Q86T90 577 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 SRLQ86TD4 932 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 TBC1D3Q8IZP1 549 aaPredicted RBP12.6□□□□□ -0.39
APTX-220ENST00000476858 GDAP1L1Q96MZ0 367 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 LGMNQ99538 433 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 C10orf88Q9H8K7 445 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 FADS3Q9Y5Q0 445 aa12.6□□□□□ -0.39
APTX-220ENST00000476858 CXorf51AA0A1B0GTR3 108 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 A0A1W2PQU0 124 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 BTNL10A8MVZ5 291 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 RAD51BO15315 384 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 POP4O95707 220 aaKnown RBP12.59□□□□□ -0.39
APTX-220ENST00000476858 FTCDO95954 541 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 IGSF6O95976 241 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 CR2P20023 1033 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 GARSP41250 739 aaKnown RBP12.59□□□□□ -0.39
APTX-220ENST00000476858 SLC1A1P43005 524 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 GEMIN4P57678 1058 aaKnown RBP12.59□□□□□ -0.39
APTX-220ENST00000476858 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 ZNF284Q2VY69 593 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 ZNF805Q5CZA5 627 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 TMCO4Q5TGY1 634 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 FAM46CQ5VWP2 391 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 KAZNQ674X7 775 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 SLC23A3Q6PIS1 610 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 SPOCD1Q6ZMY3 1216 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 RFX6Q8HWS3 928 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 LRRC8AQ8IWT6 810 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 ATPAF2Q8N5M1 289 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 LZTR1Q8N653 840 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 FOXJ1Q92949 421 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 HAUS1Q96CS2 278 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 CCDC114Q96M63 670 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 ZNF830Q96NB3 372 aaPredicted RBP12.59□□□□□ -0.39
APTX-220ENST00000476858 EDEM2Q9BV94 578 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 HDAC8Q9BY41 377 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 NT5MQ9NPB1 228 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
APTX-220ENST00000476858 hCG_1818297A0A087WSY0 165 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 A0A1W2PPC4 97 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 GOLGA6L3A6NEY3 463 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 LRRC72A6NJI9 287 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 C4orf47A7E2U8 309 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 H0Y8X5 98 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 KCNK1O00180 336 aa12.58□□□□□ -0.4
APTX-220ENST00000476858 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.4
APTX-220ENST00000476858 BCAT2O15382 392 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms