RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 CLCA4Q14CN2 919 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 MFSD13AQ14CX5 517 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 MAJINQ3KP22 176 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ZFP69Q49AA0 526 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 IQCCQ4KMZ1 466 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 AASDHQ4L235 1098 aaPredicted RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 TCP11X2Q5H9J9 407 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 EFHC1Q5JVL4 640 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 KRT79Q5XKE5 535 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ATG16L1Q676U5 607 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CNNM4Q6P4Q7 775 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 HHIPL2Q6UWX4 724 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 SLC16A12Q6ZSM3 486 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 STXBP4Q6ZWJ1 553 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ZNF767PQ75MW2 155 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 LYSMD3Q7Z3D4 306 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 PRSS42Q7Z5A4 293 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CDH24Q86UP0 819 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 HORMAD1Q86X24 394 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 RIOX2Q8IUF8 465 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 WDR49Q8IV35 697 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 RASGRP3Q8IV61 690 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 MAPKAPK5Q8IW41 473 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ADGRG2Q8IZP9 1017 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ANKRD35Q8N283 1001 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 CNTD1Q8N815 330 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 DAGLBQ8NCG7 672 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ZNF540Q8NDQ6 660 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 UTP15Q8TED0 518 aaKnown RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 YIPF5Q969M3 257 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 TRIM43Q96BQ3 446 aaPredicted RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 ZDHHC12Q96GR4 267 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 BBS4Q96RK4 519 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 C7orf25Q9BPX7 421 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 C19orf43Q9BQ61 176 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ZC3H12CQ9C0D7 883 aaKnown RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 JMJD4Q9H9V9 463 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 MLXIPLQ9NP71 852 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 DDX28Q9NUL7 540 aaKnown RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 VPS54Q9P1Q0 977 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 TRMT6Q9UJA5 497 aaKnown RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 ZNF229Q9UJW7 825 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 RPS6KA6Q9UK32 745 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 PNMA8BQ9ULN7 279 aaPredicted RBP4.2□□□□□ -1.74
CD55-208ENST00000476590 MYRFQ9Y2G1 1151 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ST14Q9Y5Y6 855 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 FRMPD4Q14CM0 1322 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 MST1RQ04912 1400 aa4.2□□□□□ -1.74
CD55-208ENST00000476590 ITSN1Q15811 1721 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 MYOCOSA0A1B0GUC4 107 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 LOC390937A0A1W2PQ73 354 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 A0A1W2PQJ5 194 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SLC12A8A0AV02 714 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 LGALS16A8MUM7 142 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 H3BMM5 538 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 H3BNH8 94 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CACNB4O00305 520 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 CTDSP2O14595 271 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PCDH17O14917 1159 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 AURKAO14965 403 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 SLC22A2O15244 555 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NUPL2O15504 423 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 POLR2DO15514 142 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 SPAG6O75602 509 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TGDSO95455 350 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 FGGP02679 453 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 POLR3DP05423 398 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 PRKCBP05771 671 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 KRT19P08727 400 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 USP17L7P0C7H9 530 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CKBP12277 381 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 APEHP13798 732 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 ENO3P13929 434 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 AKR1B1P15121 316 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 PSMC3P17980 439 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CD247P20963 164 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 CTNNA2P26232 953 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ARNTP27540 789 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 UQCRC1P31930 480 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 HNRNPH3P31942 346 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 UGT2B10P36537 528 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ZAP70P43403 619 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 RECQLP46063 649 aaPredicted RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 DNM2P50570 870 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TPMTP51580 245 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NDST1P52848 882 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NDST2P52849 883 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 JAM2P57087 298 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 GPX6P59796 221 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 YWHAEP62258 255 aaKnown RBP4.19□□□□□ -1.74
CD55-208ENST00000476590 BNC1Q01954 994 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 TNFAIP2Q03169 654 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NFATC3Q12968 1075 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 RIN1Q13671 783 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 NAB2Q15742 525 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 GRIK4Q16099 956 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 ASIC2Q16515 512 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 FAM47CQ5HY64 1035 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 FGD3Q5JSP0 725 aa4.19□□□□□ -1.74
CD55-208ENST00000476590 RARS2Q5T160 578 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms