RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CD274Q9NZQ7 290 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 GJD2Q9UKL4 321 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 POMPQ9Y244 141 aa5.05□□□□□ -1.6
CCDC39-204ENST00000476379 CNOT1A5YKK6 2376 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TNRC18O15417 2968 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 KIAA1551Q9HCM1 1747 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PRR23AA6NEV1 266 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SYCE1LA8MT33 242 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SCAMP1O15126 338 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TYROBPO43914 113 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CILPO75339 1184 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 RHOBTB1O94844 696 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SLC25A27O95847 323 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 VAV1P15498 845 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ACADSP16219 412 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SLC25A11Q02978 314 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TAP1Q03518 808 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TLE2Q04725 743 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TRAF2Q12933 501 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PTPRRQ15256 657 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TRIM60Q495X7 471 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CELF3Q5SZQ8 465 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 GPR158Q5T848 1215 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 WLSQ5T9L3 541 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 LINGO4Q6UY18 593 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ATAD1Q8NBU5 361 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 GRIN3AQ8TCU5 1115 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 OTULINQ96BN8 352 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TNIP3Q96KP6 325 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF512Q96ME7 567 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 GLT1D1Q96MS3 346 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ACOX2Q99424 681 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 WDR83Q9BRX9 315 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SYT11Q9BT88 431 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 DNAI2Q9GZS0 605 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ABHD16BQ9H3Z7 469 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 AMBNQ9NP70 447 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SUN2Q9UH99 717 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ADAMTS6Q9UKP5 1117 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PLIN4Q96Q06 1357 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PNMA8CA0A1B0GUJ8 204 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 C2CD4BA6NLJ0 364 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 H3BSA7 217 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 NRP1O14786 923 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 UBDO15205 165 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 MAFO75444 373 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 KLHL2O95198 593 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 DLDP09622 509 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SMIM10L2AP0DMW4 78 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SMIM10L2BP0DMW5 78 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 MYOGP15173 224 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 VCLP18206 1134 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 AQP1P29972 269 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 LRPAP1P30533 357 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 IDH3AP50213 366 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CYP4F2P78329 520 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 MRPS5P82675 430 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CYP4F3Q08477 520 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 LRRC74AQ0VAA2 488 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 KLF10Q13118 480 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CYP51A1Q16850 503 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TRMT5Q32P41 509 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF792Q3KQV3 632 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TIGD2Q4W5G0 525 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 RAP1GAP2Q684P5 730 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 OGFOD2Q6N063 350 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CNSTQ6PJW8 725 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SPATA2LQ8IUW3 424 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 DACT3Q96B18 629 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 HSPBAP1Q96EW2 488 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 BBS2Q9BXC9 721 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 MIR1-1HGQ9H1L0 117 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TSPYL2Q9H2G4 693 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGEF4Q9NR80 690 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PIGVQ9NUD9 493 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 KCNG1Q9UIX4 513 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PCDHGB4Q9UN71 923 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 GNEQ9Y223 722 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PCDHGB5Q9Y5G0 923 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CDY2AQ9Y6F7 541 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CDY1Q9Y6F8 540 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SIPA1L1O43166 1804 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TIAM2Q8IVF5 1701 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 EVPLQ92817 2033 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 A0A0A0MRY4 1105 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 J3QRK9 145 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 SMAPO00193 183 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 PPP6CO00743 305 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 MRASO14807 208 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TADA2AO75478 443 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 KCNH1O95259 989 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TFEBP19484 476 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 CYP3A5P20815 502 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TKTP29401 623 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 BST2Q10589 180 aaKnown RBP5.04□□□□□ -1.6
CCDC39-204ENST00000476379 BFSP2Q13515 415 aa5.04□□□□□ -1.6
CCDC39-204ENST00000476379 TLR1Q15399 786 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms