RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CACTINQ8WUQ7 758 aaKnown RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 GLMPQ8WWB7 406 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 DGAT2Q96PD7 388 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 TSPAN18Q96SJ8 248 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 GAD1Q99259 594 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 NAA11Q9BSU3 229 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 ELOVL1Q9BW60 279 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 IFIH1Q9BYX4 1025 aaKnown RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 ARHGEF38Q9NXL2 777 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 MTMR4Q9NYA4 1195 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 DLL3Q9NYJ7 618 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 CTNNAL1Q9UBT7 734 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 HSPB7Q9UBY9 170 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 INTS6Q9UL03 887 aaKnown RBP4.37□□□□□ -1.71
VPS13D-207ENST00000476169 AGTPBP1Q9UPW5 1226 aa4.37□□□□□ -1.71
VPS13D-207ENST00000476169 MYO15BQ96JP2 1530 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 QSOX1O00391 747 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 MPHOSPH10O00566 681 aaKnown RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PRPF4O43172 522 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 SUV39H1O43463 412 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 STRNO43815 780 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 HS6ST1O60243 411 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PRAMEF2O60811 474 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 KERAO60938 352 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 CBX6O95503 412 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 TTLL1O95922 423 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 C1RP00736 705 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 NPSP0C0P6 89 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 EBLN1P0CF75 366 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ERCC2P18074 760 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PRPH2P23942 346 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 KRT2P35908 639 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 MTNR1AP48039 350 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 GNAQP50148 359 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 NPY4RP50391 375 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PMS2P54278 862 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 GALCP54803 685 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 F2RL1P55085 397 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 POLR2FP61218 127 aaKnown RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 GPC5P78333 572 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 B4GALNT1Q00973 533 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 LMAN2Q12907 356 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PTK6Q13882 451 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 SNTB1Q13884 538 aaKnown RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 VEPH1Q14D04 833 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PPA1Q15181 289 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 C2orf76Q3KRA6 126 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PARP10Q53GL7 1025 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 LY6G5CQ5SRR4 150 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 KIAA0895LQ68EN5 471 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 TATDN1Q6P1N9 297 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 KIRREL2Q6UWL6 708 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 Q6ZNX1 250 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 RHOUQ7L0Q8 258 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 RNF144BQ7Z419 303 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PRRT2Q7Z6L0 340 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 SFTPA1Q8IWL2 248 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ZNF619Q8N2I2 560 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 LCORLQ8N3X6 602 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 CPXM2Q8N436 756 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 SLC44A3Q8N4M1 653 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ENDOVQ8N8Q3 282 aaKnown RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 C11orf65Q8NCR3 313 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 CTCFLQ8NI51 663 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 DUSP19Q8WTR2 217 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ZFPM2Q8WW38 1151 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 KCNE4Q8WWG9 221 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 HSPH1Q92598 858 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 PKNOX2Q96KN3 472 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 HS6ST2Q96MM7 605 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 MAP7D2Q96T17 732 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 FUT8Q9BYC5 575 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 IKZF4Q9H2S9 585 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ST6GALNAC4Q9H4F1 302 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 SLC2A4RGQ9NR83 387 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 DUSP22Q9NRW4 184 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 SNTG1Q9NSN8 517 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ABHD10Q9NUJ1 306 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 DDX43Q9NXZ2 648 aaKnown RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 OGFRQ9NZT2 677 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 AKAP7Q9P0M2 348 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 DNAJB9Q9UBS3 223 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 ADAMTS5Q9UNA0 930 aa4.36□□□□□ -1.71
VPS13D-207ENST00000476169 REXO2Q9Y3B8 237 aaKnown RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 MTF2Q9Y483 593 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-207ENST00000476169 CYP3A7-CYP3A51PA0A087WV96 503 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 OR2A25A4D2G3 310 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 H0YIZ8 118 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 STX6O43752 255 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TADA2AO75478 443 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 STAM2O75886 525 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TPPPO94811 219 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 IGHDP01880 384 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 SNRNP70P08621 437 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 PKMP14618 531 aaKnown RBP4.35□□□□□ -1.71
VPS13D-207ENST00000476169 TMEM11P17152 192 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 CYP3A7P24462 503 aa4.35□□□□□ -1.71
VPS13D-207ENST00000476169 FPR3P25089 353 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms