RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 HES6Q96HZ4 224 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 PSKH2Q96QS6 385 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 CPEB1Q9BZB8 566 aaKnown RBP15.34■□□□□ 0.05
SNX13-207ENST00000475800 KCNF1Q9H3M0 494 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 KDM4CQ9H3R0 1056 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 ZDHHC6Q9H6R6 413 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 PCDHGA5Q9Y5G8 931 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 HEY1Q9Y5J3 304 aa15.34■□□□□ 0.05
SNX13-207ENST00000475800 TNRC6BQ9UPQ9 1833 aaKnown RBP15.33■□□□□ 0.05
SNX13-207ENST00000475800 KPNA3O00505 521 aaPredicted RBP15.33■□□□□ 0.04
SNX13-207ENST00000475800 KRIT1O00522 736 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 MATN3O15232 486 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 LEFTY1O75610 366 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 RNASEH2AO75792 299 aaKnown RBP15.33■□□□□ 0.04
SNX13-207ENST00000475800 NEBLO76041 1014 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 ZNF806P0C7X5 589 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 ITGB7P26010 798 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 DYNLT1P63172 113 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 PPIDQ08752 370 aaKnown RBP15.33■□□□□ 0.04
SNX13-207ENST00000475800 SLC10A2Q12908 348 aaPredicted RBP15.33■□□□□ 0.04
SNX13-207ENST00000475800 ARSIQ5FYB1 569 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 RALGPS1Q5JS13 557 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 STPG1Q5TH74 334 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 KAZNQ674X7 775 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 BBS12Q6ZW61 710 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 AADATQ8N5Z0 425 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 MAML1Q92585 1016 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 ALG3Q92685 438 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 P3H4Q92791 437 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 FAM131CQ96AQ9 280 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 TUBGCP5Q96RT8 1024 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 HDAC8Q9BY41 377 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 OSBPL8Q9BZF1 889 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 CD93Q9NPY3 652 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 SARDHQ9UL12 918 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 TRPM6Q9BX84 2022 aa15.33■□□□□ 0.04
SNX13-207ENST00000475800 LAMA1P25391 3075 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 LRRC72A6NJI9 287 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 APOC4-APOC2K7ER74 178 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 TJP3O95049 919 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 SEMA4FO95754 770 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 PEX11BO96011 259 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 APOC2P02655 101 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 KRT10P13645 584 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 DRD3P35462 400 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 MMP13P45452 471 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 AP1S1P61966 158 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 SLC10A7Q0GE19 358 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 ZNF805Q5CZA5 627 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 ATXN7L2Q5T6C5 722 aaPredicted RBP15.32■□□□□ 0.04
SNX13-207ENST00000475800 CCDC181Q5TID7 509 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 FAM124AQ86V42 546 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 CCDC13Q8IYE1 715 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 TEX26Q8N6G2 289 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 FRMD1Q8N878 549 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 TSEN2Q8NCE0 465 aaKnown RBP15.32■□□□□ 0.04
SNX13-207ENST00000475800 HCAR2Q8TDS4 363 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 ZNF419Q96HQ0 510 aaPredicted RBP15.32■□□□□ 0.04
SNX13-207ENST00000475800 ZNF641Q96N77 438 aaPredicted RBP15.32■□□□□ 0.04
SNX13-207ENST00000475800 OLFM3Q96PB7 478 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 MGME1Q9BQP7 344 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 GPR174Q9BXC1 333 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 NEUROG2Q9H2A3 272 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 EVLQ9UI08 416 aaPredicted RBP15.32■□□□□ 0.04
SNX13-207ENST00000475800 CACNA1EQ15878 2313 aa15.32■□□□□ 0.04
SNX13-207ENST00000475800 EPG5Q9HCE0 2579 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 MAP1BP46821 2468 aaKnown RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 GOLGA6L9A6NEM1 432 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 DDX3YO15523 660 aaKnown RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 MTSS1O43312 755 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 ZNF189O75820 626 aaPredicted RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 MAP3K6O95382 1288 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 CCNB1P14635 433 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 CES1P23141 567 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 ACSL1P33121 698 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 HOXD12P35452 270 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 DHPSP49366 369 aaPredicted RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 NEK3P51956 506 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 CNTN1Q12860 1018 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 RPS6KA1Q15418 735 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 WDR45BQ5MNZ6 344 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 MEI1Q5TIA1 1274 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 LYSMD4Q5XG99 296 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 GDPD4Q6W3E5 623 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 ERN2Q76MJ5 926 aaKnown RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 ARMCX6Q7L4S7 300 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 CYP2U1Q7Z449 544 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 SRLQ86TD4 932 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 OR2T34Q8NGX1 318 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 OR6K2Q8NGY2 324 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 RAB7BQ96AH8 199 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 ATP13A3Q9H7F0 1226 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms