RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 LENG8Q96PV6 779 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 ERGIC2Q96RQ1 377 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 AGPAT1Q99943 283 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 NRSN2Q9GZP1 204 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 MAGEH1Q9H213 219 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 TCEAL2Q9H3H9 227 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 RETREG1Q9H6L5 497 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 DYRK4Q9NR20 520 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 MBNL1Q9NR56 388 aaKnown RBP7.13□□□□□ -1.27
HDAC3-207ENST00000475549 DNAJC28Q9NX36 388 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 FZD10Q9ULW2 581 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 CLCA2Q9UQC9 943 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 PCDHB1Q9Y5F3 818 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 PLXNA2O75051 1894 aa7.13□□□□□ -1.27
HDAC3-207ENST00000475549 KALRNO60229 2985 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 A0A1W2PNU3 283 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 A6NNZ2 444 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 WASH4PA8MWX3 477 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 RASA4BC9J798 803 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 J3KR12 359 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 TEX33O43247 280 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 RASA4O43374 803 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 TSPAN6O43657 245 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 BUB1O43683 1085 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 OPA1O60313 960 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 BRINP1O60477 761 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 BUB1BO60566 1050 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 MMP20O60882 483 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 RAMP2O60895 175 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 TMCC1O94876 653 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 GSRP00390 522 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 MT-CO3P00414 261 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 UGT2B4P06133 528 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 TGM2P21980 687 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 EPHB2P29323 1055 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 HNF1BP35680 557 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 SGCGQ13326 291 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 MAMLD1Q13495 774 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 SERINC3Q13530 473 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 PDE1CQ14123 709 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 CA9Q16790 459 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 KCTD16Q68DU8 428 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 ACAD10Q6JQN1 1059 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 SCYL2Q6P3W7 929 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 GDPD4Q6W3E5 623 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 KYAT3Q6YP21 454 aaKnown RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 CYP4V2Q6ZWL3 525 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 TTC7BQ86TV6 843 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 ZSWIM9Q86XI8 627 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 MCOLN2Q8IZK6 566 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 UMODL1-AS1Q8N2C9 162 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 FAM181AQ8N9Y4 354 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 ZNF548Q8NEK5 533 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 ASB12Q8WXK4 309 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 RAB7BQ96AH8 199 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 IFT43Q96FT9 208 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 SELENOOQ9BVL4 669 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 TTYH3Q9C0H2 523 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 LRRC19Q9H756 370 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 PDFQ9HBH1 243 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 NLGN3Q9NZ94 848 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 MFHAS1Q9Y4C4 1052 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 AK5Q9Y6K8 562 aa7.12□□□□□ -1.27
HDAC3-207ENST00000475549 URB1O60287 2271 aaKnown RBP7.12□□□□□ -1.27
HDAC3-207ENST00000475549 FASNP49327 2511 aaKnown RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 TMEM131Q92545 1883 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 COL5A1P20908 1838 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 BAHCC1Q9P281 2608 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 MGAQ8IWI9 3026 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 PMS2P1A4D2B8 440 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 CREB3O43889 395 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 CALB1P05937 261 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 CELA2BP08218 269 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 IGFALSP35858 605 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 ETFBP38117 255 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 RABIFP47224 123 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 RGRP47804 291 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 HNRNPKP61978 463 aaKnown RBP eCLIP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 SNRPD1P62314 119 aaKnown RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 E2F1Q01094 437 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 MYL5Q02045 173 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 CDKN3Q16667 212 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 DEFB133Q30KQ1 61 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 INO80DQ53TQ3 878 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 E4F1Q66K89 784 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 PTAR1Q7Z6K3 402 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 PARGQ86W56 976 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 DCP2Q8IU60 420 aaKnown RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 TP53INP2Q8IXH6 220 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 RBFAQ8N0V3 343 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 NEK11Q8NG66 645 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 FAM174AQ8TBP5 190 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 FGF11Q92914 225 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 NXPE2Q96DL1 559 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 HIC2Q96JB3 615 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 EXOC2Q96KP1 924 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 NAP1L5Q96NT1 182 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-207ENST00000475549 MCEEQ96PE7 176 aa7.11□□□□□ -1.27
HDAC3-207ENST00000475549 PEBP4Q96S96 227 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms