RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 REXO5Q96IC2 774 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 ACAT2Q9BWD1 397 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 AASDHPPTQ9NRN7 309 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 ATP6AP2A0A1C7CYW4 349 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 ATP6AP2O75787 350 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 TFEBP19484 476 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 AGMOQ6ZNB7 445 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 CATSPERGQ6ZRH7 1159 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 PIGZQ86VD9 579 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 GDF3Q9NR23 364 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 H3BMM5 538 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 CHADO15335 359 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 MMP14P50281 582 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 PLA2G4EQ3MJ16 856 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 RERGQ96A58 199 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 NARS2Q96I59 477 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 TMEM134Q9H6X4 195 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 MSRAQ9UJ68 235 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 OGDHLQ9ULD0 1010 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 TMEM191CA6NGB0 347 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 TNFAIP8O95379 198 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 TLX1P31314 330 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 SLC25A3Q00325 362 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 PPP1R26Q5T8A7 1209 aaPredicted RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 FAM151BQ6UXP7 276 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 MAB21L3Q8N8X9 362 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 ATXN2LQ8WWM7 1075 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 RPRD1BQ9NQG5 326 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 MRPS7Q9Y2R9 242 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 ISM1B1AKI9 464 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 EIF2B2P49770 351 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 LSM3P62310 102 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 PTPRNQ16849 979 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 SPANXN2Q5MJ10 180 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 HYIQ5T013 277 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 EIF3MQ7L2H7 374 aaKnown RBP11.06□□□□□ -0.64
VAPB-204ENST00000475243 ADHFE1Q8IWW8 467 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 VAT1Q99536 393 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 LGMNQ99538 433 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 VAV3Q9UKW4 847 aa11.06□□□□□ -0.64
VAPB-204ENST00000475243 PSMD11O00231 422 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 ZNF24P17028 368 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 MAPKAPK3Q16644 382 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 KCTD21Q4G0X4 260 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 USP50Q70EL3 339 aaPredicted RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 UTS2BQ765I0 119 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 PRKAB1Q9Y478 270 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 OR10H1Q9Y4A9 318 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 GUCY1B2O75343 617 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 PRG2P13727 222 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 ATP4AP20648 1035 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 ZNF143P52747 638 aaPredicted RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 ZFP1Q6P2D0 407 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 CDYL2Q8N8U2 506 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 NOL6Q9H6R4 1146 aaKnown RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 RABGEF1Q9UJ41 708 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 CDH9Q9ULB4 789 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 PAPSS1O43252 624 aaPredicted RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 B4GALT5O43286 388 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 NR2F1P10589 423 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 C1orf50Q9BV19 199 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 MECRQ9BV79 373 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 ANAPC2Q9UJX6 822 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 TNPO3Q9Y5L0 923 aaKnown RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 CD3EAPO15446 510 aaKnown RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 SLC25A12O75746 678 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 SEMA5AQ13591 1074 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 WASHC2DQ5SRD0 308 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 KLHL24Q6TFL4 600 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 GPR142Q7Z601 462 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 SMYD1Q8NB12 490 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 KCTD4Q8WVF5 259 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 NDRG1Q92597 394 aaKnown RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 ASB2Q96Q27 587 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 POLR1BQ9H9Y6 1135 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 DIABLOQ9NR28 239 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 MARCKSL1P49006 195 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 RPL38P63173 70 aaKnown RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 CPSF6Q16630 551 aaKnown RBP eCLIP11.05□□□□□ -0.64
VAPB-204ENST00000475243 PLPP4Q5VZY2 271 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 DENND6AQ8IWF6 608 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 TMEM199Q8N511 208 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 SETD9Q8NE22 299 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 HAS1Q92839 578 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 PLK2Q9NYY3 685 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 COPG2Q9UBF2 871 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 LIASO43766 372 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 TLL1O43897 1013 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 CXCL14O95715 111 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 HNRNPLP14866 589 aaKnown RBP eCLIP11.05□□□□□ -0.644e-8■■■■□ 19.4
VAPB-204ENST00000475243 RPL4P36578 427 aaKnown RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 ZNHIT3Q15649 155 aaPredicted RBP11.05□□□□□ -0.64
VAPB-204ENST00000475243 HDAC10Q969S8 669 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms